Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ALFQ53S48 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ALFQ53S48 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.78■□□□□ 0.76
ALFQ53S48 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.78■□□□□ 0.76
ALFQ53S48 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.78■□□□□ 0.76
ALFQ53S48 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.78■□□□□ 0.76
ALFQ53S48 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.78■□□□□ 0.76
ALFQ53S48 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALFQ53S48 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ALFQ53S48 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ALFQ53S48 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ALFQ53S48 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.77■□□□□ 0.76
ALFQ53S48 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.77■□□□□ 0.76
ALFQ53S48 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALFQ53S48 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALFQ53S48 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALFQ53S48 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALFQ53S48 UNC93B2-201ENST00000285383 730 ntBASIC19.77■□□□□ 0.76
ALFQ53S48 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.77■□□□□ 0.76
ALFQ53S48 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ALFQ53S48 BX088651.1-201ENST00000540551 451 ntBASIC19.77■□□□□ 0.76
ALFQ53S48 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.77■□□□□ 0.76
ALFQ53S48 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALFQ53S48 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALFQ53S48 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALFQ53S48 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.77■□□□□ 0.76
ALFQ53S48 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
ALFQ53S48 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ALFQ53S48 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ALFQ53S48 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.76■□□□□ 0.75
ALFQ53S48 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALFQ53S48 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALFQ53S48 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ALFQ53S48 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALFQ53S48 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALFQ53S48 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALFQ53S48 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ALFQ53S48 AL390955.1-201ENST00000428694 934 ntBASIC19.76■□□□□ 0.75
ALFQ53S48 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.76■□□□□ 0.75
ALFQ53S48 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ALFQ53S48 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ALFQ53S48 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ALFQ53S48 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ALFQ53S48 AP000692.2-201ENST00000608391 879 ntBASIC19.76■□□□□ 0.75
ALFQ53S48 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.76■□□□□ 0.75
ALFQ53S48 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.76■□□□□ 0.75
ALFQ53S48 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALFQ53S48 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.76■□□□□ 0.75
ALFQ53S48 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.76■□□□□ 0.75
ALFQ53S48 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.75■□□□□ 0.75
ALFQ53S48 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALFQ53S48 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ALFQ53S48 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.75■□□□□ 0.75
ALFQ53S48 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.75■□□□□ 0.75
ALFQ53S48 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.75■□□□□ 0.75
ALFQ53S48 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALFQ53S48 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ALFQ53S48 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.75■□□□□ 0.75
ALFQ53S48 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALFQ53S48 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ALFQ53S48 FAM207BP-201ENST00000447172 505 ntBASIC19.75■□□□□ 0.75
ALFQ53S48 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.75■□□□□ 0.75
ALFQ53S48 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.75■□□□□ 0.75
ALFQ53S48 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ALFQ53S48 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.75■□□□□ 0.75
ALFQ53S48 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALFQ53S48 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.75■□□□□ 0.75
ALFQ53S48 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALFQ53S48 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALFQ53S48 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.75■□□□□ 0.75
ALFQ53S48 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.75■□□□□ 0.75
ALFQ53S48 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
ALFQ53S48 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ALFQ53S48 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.74■□□□□ 0.75
ALFQ53S48 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
ALFQ53S48 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.74■□□□□ 0.75
ALFQ53S48 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ALFQ53S48 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
ALFQ53S48 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ALFQ53S48 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.74■□□□□ 0.75
ALFQ53S48 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms