Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB6CQ53S08 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB6CQ53S08 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.02■□□□□ 0.8
RAB6CQ53S08 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.02■□□□□ 0.8
RAB6CQ53S08 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.02■□□□□ 0.8
RAB6CQ53S08 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB6CQ53S08 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.02■□□□□ 0.8
RAB6CQ53S08 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RAB6CQ53S08 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB6CQ53S08 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB6CQ53S08 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB6CQ53S08 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB6CQ53S08 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB6CQ53S08 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB6CQ53S08 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB6CQ53S08 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB6CQ53S08 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.02■□□□□ 0.79
RAB6CQ53S08 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB6CQ53S08 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RAB6CQ53S08 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RAB6CQ53S08 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB6CQ53S08 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB6CQ53S08 MESTP1-201ENST00000404287 994 ntBASIC20.01■□□□□ 0.79
RAB6CQ53S08 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 KSR1P1-201ENST00000446298 240 ntBASIC20.01■□□□□ 0.79
RAB6CQ53S08 AC011506.1-201ENST00000474329 610 ntBASIC20.01■□□□□ 0.79
RAB6CQ53S08 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 AC073195.1-201ENST00000607241 877 ntBASIC20.01■□□□□ 0.79
RAB6CQ53S08 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB6CQ53S08 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB6CQ53S08 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB6CQ53S08 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB6CQ53S08 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB6CQ53S08 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RAB6CQ53S08 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RAB6CQ53S08 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20■□□□□ 0.79
RAB6CQ53S08 IRX1P1-201ENST00000438849 1838 ntBASIC20■□□□□ 0.79
RAB6CQ53S08 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RAB6CQ53S08 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20■□□□□ 0.79
RAB6CQ53S08 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RAB6CQ53S08 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 AC008550.1-201ENST00000511500 884 ntBASIC20■□□□□ 0.79
RAB6CQ53S08 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RAB6CQ53S08 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20■□□□□ 0.79
RAB6CQ53S08 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20■□□□□ 0.79
RAB6CQ53S08 KRT16P1-201ENST00000399124 1418 ntBASIC20■□□□□ 0.79
RAB6CQ53S08 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20■□□□□ 0.79
RAB6CQ53S08 AC018445.3-201ENST00000624177 1945 ntBASIC20■□□□□ 0.79
RAB6CQ53S08 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB6CQ53S08 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RAB6CQ53S08 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB6CQ53S08 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB6CQ53S08 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB6CQ53S08 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB6CQ53S08 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB6CQ53S08 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB6CQ53S08 TSPY23P-201ENST00000440136 739 ntBASIC19.99■□□□□ 0.79
RAB6CQ53S08 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB6CQ53S08 AC233702.5-201ENST00000584107 538 ntBASIC19.99■□□□□ 0.79
RAB6CQ53S08 CD177P1-201ENST00000606252 935 ntBASIC19.99■□□□□ 0.79
RAB6CQ53S08 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB6CQ53S08 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB6CQ53S08 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB6CQ53S08 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.99■□□□□ 0.79
RAB6CQ53S08 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB6CQ53S08 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB6CQ53S08 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB6CQ53S08 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RAB6CQ53S08 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RAB6CQ53S08 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB6CQ53S08 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RAB6CQ53S08 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB6CQ53S08 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.98■□□□□ 0.79
RAB6CQ53S08 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
RAB6CQ53S08 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB6CQ53S08 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.98■□□□□ 0.79
RAB6CQ53S08 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB6CQ53S08 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB6CQ53S08 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RAB6CQ53S08 AC091390.4-202ENST00000476426 537 ntBASIC19.98■□□□□ 0.79
RAB6CQ53S08 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms