Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 AC124283.5-201ENST00000624661 1809 ntBASIC18.46■□□□□ 0.55
PDCD4Q53EL6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.46■□□□□ 0.55
PDCD4Q53EL6 AC079598.2-202ENST00000546624 1451 ntBASIC18.46■□□□□ 0.54
PDCD4Q53EL6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 AC009113.1-201ENST00000570267 2443 ntBASIC18.45■□□□□ 0.54
PDCD4Q53EL6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 RPS2P52-201ENST00000469610 820 ntBASIC18.45■□□□□ 0.54
PDCD4Q53EL6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 RAP2CP1-201ENST00000605103 478 ntBASIC18.45■□□□□ 0.54
PDCD4Q53EL6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDCD4Q53EL6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.44■□□□□ 0.54
PDCD4Q53EL6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 AC022517.1-201ENST00000592429 346 ntBASIC18.44■□□□□ 0.54
PDCD4Q53EL6 AC006557.6-201ENST00000623071 864 ntBASIC18.44■□□□□ 0.54
PDCD4Q53EL6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 AC007613.1-201ENST00000572811 2597 ntBASIC18.44■□□□□ 0.54
PDCD4Q53EL6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 AP006587.1-201ENST00000534129 1502 ntBASIC18.44■□□□□ 0.54
PDCD4Q53EL6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.44■□□□□ 0.54
PDCD4Q53EL6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 WIZP1-201ENST00000531444 2299 ntBASIC18.43■□□□□ 0.54
PDCD4Q53EL6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 FZD10-202ENST00000539839 3282 ntBASIC18.43■□□□□ 0.54
PDCD4Q53EL6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 AC080038.1-201ENST00000611274 1154 ntBASIC18.43■□□□□ 0.54
PDCD4Q53EL6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 AC073111.5-205ENST00000641717 521 ntBASIC18.43■□□□□ 0.54
PDCD4Q53EL6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 AC090164.3-201ENST00000610780 2143 ntBASIC18.43■□□□□ 0.54
PDCD4Q53EL6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDCD4Q53EL6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms