Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RAB40BQ12829 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40BQ12829 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40BQ12829 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB40BQ12829 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40BQ12829 HCG11-201ENST00000411553 5696 ntBASIC17.22■□□□□ 0.35
RAB40BQ12829 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40BQ12829 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
RAB40BQ12829 AC010980.2-201ENST00000587099 1412 ntBASIC17.21■□□□□ 0.35
RAB40BQ12829 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.21■□□□□ 0.35
RAB40BQ12829 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40BQ12829 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAB40BQ12829 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40BQ12829 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40BQ12829 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB40BQ12829 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40BQ12829 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40BQ12829 PCDHB18P-201ENST00000524813 2368 ntBASIC17.21■□□□□ 0.35
RAB40BQ12829 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAB40BQ12829 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40BQ12829 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB40BQ12829 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40BQ12829 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB40BQ12829 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40BQ12829 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40BQ12829 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAB40BQ12829 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB40BQ12829 AC090340.1-201ENST00000620778 4980 ntBASIC17.21■□□□□ 0.35
RAB40BQ12829 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAB40BQ12829 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB40BQ12829 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40BQ12829 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAB40BQ12829 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB40BQ12829 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40BQ12829 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.21■□□□□ 0.34
RAB40BQ12829 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RAB40BQ12829 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
RAB40BQ12829 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RAB40BQ12829 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40BQ12829 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB40BQ12829 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
RAB40BQ12829 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40BQ12829 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.2■□□□□ 0.34
RAB40BQ12829 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40BQ12829 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40BQ12829 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB40BQ12829 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40BQ12829 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
RAB40BQ12829 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40BQ12829 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40BQ12829 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40BQ12829 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 FEM1AP3-201ENST00000403722 1741 ntBASIC17.19■□□□□ 0.34
RAB40BQ12829 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40BQ12829 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RAB40BQ12829 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40BQ12829 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40BQ12829 AC137761.2-201ENST00000561729 223 ntBASIC17.19■□□□□ 0.34
RAB40BQ12829 AC145350.3-201ENST00000569033 163 ntBASIC17.19■□□□□ 0.34
RAB40BQ12829 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40BQ12829 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.19■□□□□ 0.34
RAB40BQ12829 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
RAB40BQ12829 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 OR10C1-204ENST00000622521 1039 ntBASIC17.19■□□□□ 0.34
RAB40BQ12829 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40BQ12829 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40BQ12829 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RAB40BQ12829 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40BQ12829 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40BQ12829 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms