Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDK3Q00526 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK3Q00526 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK3Q00526 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDK3Q00526 AC128688.1-201ENST00000487626 519 ntBASIC18.94■□□□□ 0.62
CDK3Q00526 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.94■□□□□ 0.62
CDK3Q00526 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CDK3Q00526 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CDK3Q00526 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDK3Q00526 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDK3Q00526 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK3Q00526 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK3Q00526 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK3Q00526 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK3Q00526 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CDK3Q00526 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK3Q00526 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK3Q00526 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK3Q00526 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK3Q00526 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK3Q00526 AL158211.5-201ENST00000623583 2518 ntBASIC18.94■□□□□ 0.62
CDK3Q00526 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDK3Q00526 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK3Q00526 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK3Q00526 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.93■□□□□ 0.62
CDK3Q00526 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.93■□□□□ 0.62
CDK3Q00526 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
CDK3Q00526 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK3Q00526 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDK3Q00526 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CDK3Q00526 RCN1P1-201ENST00000400413 996 ntBASIC18.93■□□□□ 0.62
CDK3Q00526 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.93■□□□□ 0.62
CDK3Q00526 SLC25A1P2-201ENST00000430693 912 ntBASIC18.93■□□□□ 0.62
CDK3Q00526 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.93■□□□□ 0.62
CDK3Q00526 KRT18P21-201ENST00000515767 1272 ntBASIC18.93■□□□□ 0.62
CDK3Q00526 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
CDK3Q00526 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.93■□□□□ 0.62
CDK3Q00526 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.93■□□□□ 0.62
CDK3Q00526 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK3Q00526 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CDK3Q00526 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK3Q00526 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK3Q00526 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
CDK3Q00526 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.93■□□□□ 0.62
CDK3Q00526 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
CDK3Q00526 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.93■□□□□ 0.62
CDK3Q00526 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK3Q00526 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK3Q00526 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDK3Q00526 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDK3Q00526 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK3Q00526 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDK3Q00526 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK3Q00526 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK3Q00526 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK3Q00526 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK3Q00526 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK3Q00526 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.92■□□□□ 0.62
CDK3Q00526 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK3Q00526 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDK3Q00526 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK3Q00526 INGX-201ENST00000359239 846 ntBASIC18.92■□□□□ 0.62
CDK3Q00526 AC113347.1-201ENST00000413321 391 ntBASIC18.92■□□□□ 0.62
CDK3Q00526 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.92■□□□□ 0.62
CDK3Q00526 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK3Q00526 TSPY21P-201ENST00000433481 731 ntBASIC18.92■□□□□ 0.62
CDK3Q00526 TSPY23P-201ENST00000440136 739 ntBASIC18.92■□□□□ 0.62
CDK3Q00526 ECEL1P2-202ENST00000465689 757 ntBASIC18.92■□□□□ 0.62
CDK3Q00526 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK3Q00526 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK3Q00526 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDK3Q00526 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CDK3Q00526 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.92■□□□□ 0.62
CDK3Q00526 AC116562.4-202ENST00000641738 218 ntBASIC18.92■□□□□ 0.62
CDK3Q00526 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.92■□□□□ 0.62
CDK3Q00526 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK3Q00526 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.92■□□□□ 0.62
CDK3Q00526 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDK3Q00526 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK3Q00526 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK3Q00526 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK3Q00526 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK3Q00526 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CDK3Q00526 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.91■□□□□ 0.62
CDK3Q00526 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK3Q00526 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK3Q00526 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK3Q00526 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK3Q00526 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.91■□□□□ 0.62
CDK3Q00526 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK3Q00526 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK3Q00526 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
CDK3Q00526 SLC25A3P1-201ENST00000443844 931 ntBASIC18.91■□□□□ 0.62
CDK3Q00526 CCR12P-201ENST00000446203 998 ntBASIC18.91■□□□□ 0.62
CDK3Q00526 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.91■□□□□ 0.62
CDK3Q00526 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.91■□□□□ 0.62
CDK3Q00526 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CDK3Q00526 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK3Q00526 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK3Q00526 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms