Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.49■□□□□ 0.07
CX3CL1P78423 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.49■□□□□ 0.07
CX3CL1P78423 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CX3CL1P78423 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CX3CL1P78423 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.49■□□□□ 0.07
CX3CL1P78423 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CX3CL1P78423 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CX3CL1P78423 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CX3CL1P78423 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.49■□□□□ 0.07
CX3CL1P78423 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.48■□□□□ 0.07
CX3CL1P78423 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CX3CL1P78423 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.48■□□□□ 0.07
CX3CL1P78423 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.48■□□□□ 0.07
CX3CL1P78423 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CX3CL1P78423 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.48■□□□□ 0.07
CX3CL1P78423 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.48■□□□□ 0.07
CX3CL1P78423 AC239809.2-201ENST00000415381 517 ntBASIC15.48■□□□□ 0.07
CX3CL1P78423 TUBB8P6-201ENST00000436895 1288 ntBASIC15.48■□□□□ 0.07
CX3CL1P78423 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.48■□□□□ 0.07
CX3CL1P78423 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.48■□□□□ 0.07
CX3CL1P78423 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.48■□□□□ 0.07
CX3CL1P78423 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.48■□□□□ 0.07
CX3CL1P78423 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CX3CL1P78423 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CX3CL1P78423 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.48■□□□□ 0.07
CX3CL1P78423 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CX3CL1P78423 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CX3CL1P78423 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CX3CL1P78423 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CX3CL1P78423 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 KRT18P29-201ENST00000397031 1267 ntBASIC15.47■□□□□ 0.07
CX3CL1P78423 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 KRASP1-201ENST00000407852 552 ntBASIC15.47■□□□□ 0.07
CX3CL1P78423 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CX3CL1P78423 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.47■□□□□ 0.07
CX3CL1P78423 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.47■□□□□ 0.07
CX3CL1P78423 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.47■□□□□ 0.07
CX3CL1P78423 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CX3CL1P78423 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.47■□□□□ 0.07
CX3CL1P78423 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CX3CL1P78423 AC004264.1-201ENST00000608354 794 ntBASIC15.47■□□□□ 0.07
CX3CL1P78423 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.47■□□□□ 0.07
CX3CL1P78423 ITM2C-210ENST00000620962 501 ntBASIC15.47■□□□□ 0.07
CX3CL1P78423 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CX3CL1P78423 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.47■□□□□ 0.07
CX3CL1P78423 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CX3CL1P78423 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
CX3CL1P78423 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CX3CL1P78423 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CX3CL1P78423 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CX3CL1P78423 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CX3CL1P78423 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CX3CL1P78423 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CX3CL1P78423 KRT8P8-201ENST00000434750 1448 ntBASIC15.46■□□□□ 0.07
CX3CL1P78423 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CX3CL1P78423 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
CX3CL1P78423 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CX3CL1P78423 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.46■□□□□ 0.07
CX3CL1P78423 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.46■□□□□ 0.07
CX3CL1P78423 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CX3CL1P78423 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CX3CL1P78423 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CX3CL1P78423 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms