Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC10.33□□□□□ -0.76
SEC61BP60468 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC10.33□□□□□ -0.76
SEC61BP60468 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SEC61BP60468 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC10.33□□□□□ -0.76
SEC61BP60468 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC10.33□□□□□ -0.76
SEC61BP60468 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC10.33□□□□□ -0.76
SEC61BP60468 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 AC008040.2-201ENST00000461049 708 ntBASIC10.33□□□□□ -0.76
SEC61BP60468 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC10.33□□□□□ -0.76
SEC61BP60468 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC10.33□□□□□ -0.76
SEC61BP60468 CKBP1-201ENST00000565489 1086 ntBASIC10.33□□□□□ -0.76
SEC61BP60468 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
SEC61BP60468 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC10.33□□□□□ -0.76
SEC61BP60468 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
SEC61BP60468 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SEC61BP60468 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC10.33□□□□□ -0.76
SEC61BP60468 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC10.33□□□□□ -0.76
SEC61BP60468 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC10.33□□□□□ -0.76
SEC61BP60468 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC10.33□□□□□ -0.76
SEC61BP60468 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
SEC61BP60468 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
SEC61BP60468 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SEC61BP60468 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SEC61BP60468 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC10.33□□□□□ -0.76
SEC61BP60468 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SEC61BP60468 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC10.33□□□□□ -0.76
SEC61BP60468 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 MOK-225ENST00000522867 1883 ntTSL 5 BASIC10.32□□□□□ -0.76
SEC61BP60468 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC10.32□□□□□ -0.76
SEC61BP60468 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 ME2-216ENST00000639850 2331 ntTSL 5 BASIC10.32□□□□□ -0.76
SEC61BP60468 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC10.32□□□□□ -0.76
SEC61BP60468 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
SEC61BP60468 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC10.32□□□□□ -0.76
SEC61BP60468 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
SEC61BP60468 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC10.32□□□□□ -0.76
SEC61BP60468 UPK3BP1-201ENST00000428678 509 ntBASIC10.32□□□□□ -0.76
SEC61BP60468 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC10.32□□□□□ -0.76
SEC61BP60468 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC10.32□□□□□ -0.76
SEC61BP60468 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 AL023803.3-201ENST00000615559 522 ntBASIC10.32□□□□□ -0.76
SEC61BP60468 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SEC61BP60468 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
SEC61BP60468 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC10.32□□□□□ -0.76
SEC61BP60468 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC10.32□□□□□ -0.76
SEC61BP60468 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
SEC61BP60468 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC10.32□□□□□ -0.76
SEC61BP60468 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SEC61BP60468 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC10.32□□□□□ -0.76
SEC61BP60468 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC10.32□□□□□ -0.76
SEC61BP60468 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SEC61BP60468 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
SEC61BP60468 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC10.31□□□□□ -0.76
SEC61BP60468 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC10.31□□□□□ -0.76
SEC61BP60468 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SEC61BP60468 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SEC61BP60468 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC10.31□□□□□ -0.76
SEC61BP60468 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SEC61BP60468 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC10.31□□□□□ -0.76
SEC61BP60468 WWC2-AS2-201ENST00000578387 2183 ntBASIC10.31□□□□□ -0.76
SEC61BP60468 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SEC61BP60468 INGX-201ENST00000359239 846 ntBASIC10.31□□□□□ -0.76
SEC61BP60468 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC10.31□□□□□ -0.76
SEC61BP60468 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SEC61BP60468 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms