Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.35□□□□□ -0.11
CMC4P56277 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.35□□□□□ -0.11
CMC4P56277 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 MIR6786-201ENST00000616843 113 ntBASIC14.35□□□□□ -0.11
CMC4P56277 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CMC4P56277 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CMC4P56277 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CMC4P56277 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.35□□□□□ -0.11
CMC4P56277 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.35□□□□□ -0.11
CMC4P56277 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CMC4P56277 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CMC4P56277 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CMC4P56277 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.34□□□□□ -0.11
CMC4P56277 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.34□□□□□ -0.11
CMC4P56277 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 AC130371.2-201ENST00000619443 611 ntBASIC14.34□□□□□ -0.11
CMC4P56277 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CMC4P56277 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 AC112907.3-201ENST00000577781 2400 ntBASIC14.34□□□□□ -0.11
CMC4P56277 TREX1-205ENST00000625293 1783 ntBASIC14.34□□□□□ -0.11
CMC4P56277 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.34□□□□□ -0.11
CMC4P56277 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CMC4P56277 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CMC4P56277 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.33□□□□□ -0.11
CMC4P56277 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CMC4P56277 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CMC4P56277 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CMC4P56277 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CMC4P56277 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CMC4P56277 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CMC4P56277 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CMC4P56277 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CMC4P56277 AC104417.2-201ENST00000562989 1793 ntBASIC14.33□□□□□ -0.12
CMC4P56277 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.33□□□□□ -0.12
CMC4P56277 UNC93B2-201ENST00000285383 730 ntBASIC14.33□□□□□ -0.12
CMC4P56277 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMC4P56277 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CMC4P56277 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.33□□□□□ -0.12
CMC4P56277 FAM207BP-201ENST00000447172 505 ntBASIC14.33□□□□□ -0.12
CMC4P56277 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.33□□□□□ -0.12
CMC4P56277 PRSS44-201ENST00000515154 1146 ntBASIC14.33□□□□□ -0.12
CMC4P56277 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMC4P56277 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.33□□□□□ -0.12
CMC4P56277 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.33□□□□□ -0.12
CMC4P56277 AC011298.2-201ENST00000617989 482 ntBASIC14.33□□□□□ -0.12
CMC4P56277 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CMC4P56277 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMC4P56277 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMC4P56277 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CMC4P56277 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.33□□□□□ -0.12
CMC4P56277 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMC4P56277 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMC4P56277 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMC4P56277 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CMC4P56277 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CMC4P56277 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.32□□□□□ -0.12
CMC4P56277 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.32□□□□□ -0.12
CMC4P56277 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms