Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GFRA1P56159 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.26■□□□□ 0.35
GFRA1P56159 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
GFRA1P56159 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.25■□□□□ 0.35
GFRA1P56159 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA1P56159 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA1P56159 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA1P56159 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA1P56159 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GFRA1P56159 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA1P56159 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA1P56159 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA1P56159 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA1P56159 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA1P56159 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA1P56159 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA1P56159 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA1P56159 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA1P56159 TSPY21P-201ENST00000433481 731 ntBASIC17.25■□□□□ 0.35
GFRA1P56159 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.25■□□□□ 0.35
GFRA1P56159 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.25■□□□□ 0.35
GFRA1P56159 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA1P56159 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
GFRA1P56159 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GFRA1P56159 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.25■□□□□ 0.35
GFRA1P56159 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA1P56159 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.25■□□□□ 0.35
GFRA1P56159 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GFRA1P56159 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.24■□□□□ 0.35
GFRA1P56159 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.24■□□□□ 0.35
GFRA1P56159 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
GFRA1P56159 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
GFRA1P56159 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
GFRA1P56159 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
GFRA1P56159 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.24■□□□□ 0.35
GFRA1P56159 CA15P1-201ENST00000481698 905 ntBASIC17.24■□□□□ 0.35
GFRA1P56159 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.24■□□□□ 0.35
GFRA1P56159 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.24■□□□□ 0.35
GFRA1P56159 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
GFRA1P56159 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.24■□□□□ 0.35
GFRA1P56159 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
GFRA1P56159 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.24■□□□□ 0.35
GFRA1P56159 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
GFRA1P56159 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GFRA1P56159 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 Z82202.1-201ENST00000623446 1880 ntBASIC17.24■□□□□ 0.35
GFRA1P56159 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GFRA1P56159 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.24■□□□□ 0.35
GFRA1P56159 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA1P56159 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.24■□□□□ 0.35
GFRA1P56159 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GFRA1P56159 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
GFRA1P56159 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.23■□□□□ 0.35
GFRA1P56159 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.23■□□□□ 0.35
GFRA1P56159 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.23■□□□□ 0.35
GFRA1P56159 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 TSPY23P-201ENST00000440136 739 ntBASIC17.23■□□□□ 0.35
GFRA1P56159 AC128688.1-201ENST00000487626 519 ntBASIC17.23■□□□□ 0.35
GFRA1P56159 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.23■□□□□ 0.35
GFRA1P56159 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
GFRA1P56159 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.23■□□□□ 0.35
GFRA1P56159 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.23■□□□□ 0.35
GFRA1P56159 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GFRA1P56159 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA1P56159 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.23■□□□□ 0.35
GFRA1P56159 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.23■□□□□ 0.35
GFRA1P56159 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
GFRA1P56159 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.22■□□□□ 0.35
GFRA1P56159 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GFRA1P56159 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GFRA1P56159 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GFRA1P56159 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GFRA1P56159 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GFRA1P56159 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GFRA1P56159 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
GFRA1P56159 INGX-201ENST00000359239 846 ntBASIC17.22■□□□□ 0.35
GFRA1P56159 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GFRA1P56159 RCN1P1-201ENST00000400413 996 ntBASIC17.22■□□□□ 0.35
GFRA1P56159 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms