Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH4P55283 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH4P55283 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH4P55283 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH4P55283 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDH4P55283 PRSS44-201ENST00000515154 1146 ntBASIC19.68■□□□□ 0.74
CDH4P55283 CKBP1-201ENST00000565489 1086 ntBASIC19.68■□□□□ 0.74
CDH4P55283 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH4P55283 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH4P55283 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.68■□□□□ 0.74
CDH4P55283 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH4P55283 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH4P55283 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH4P55283 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH4P55283 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH4P55283 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDH4P55283 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH4P55283 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH4P55283 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH4P55283 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
CDH4P55283 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
CDH4P55283 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH4P55283 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH4P55283 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH4P55283 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH4P55283 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH4P55283 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH4P55283 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH4P55283 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDH4P55283 KRT8P9-201ENST00000558927 1449 ntBASIC19.67■□□□□ 0.74
CDH4P55283 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH4P55283 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH4P55283 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH4P55283 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CDH4P55283 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH4P55283 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH4P55283 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH4P55283 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH4P55283 TSPY23P-201ENST00000440136 739 ntBASIC19.66■□□□□ 0.74
CDH4P55283 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH4P55283 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH4P55283 NAPSB-206ENST00000562112 1266 ntBASIC19.66■□□□□ 0.74
CDH4P55283 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH4P55283 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH4P55283 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH4P55283 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CDH4P55283 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH4P55283 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH4P55283 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH4P55283 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH4P55283 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH4P55283 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH4P55283 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDH4P55283 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH4P55283 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH4P55283 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH4P55283 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDH4P55283 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH4P55283 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDH4P55283 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH4P55283 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH4P55283 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH4P55283 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH4P55283 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH4P55283 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH4P55283 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH4P55283 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.65■□□□□ 0.74
CDH4P55283 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH4P55283 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH4P55283 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH4P55283 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH4P55283 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH4P55283 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH4P55283 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDH4P55283 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
CDH4P55283 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.64■□□□□ 0.74
CDH4P55283 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDH4P55283 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH4P55283 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH4P55283 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH4P55283 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH4P55283 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH4P55283 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH4P55283 AC211429.1-201ENST00000415277 523 ntBASIC19.64■□□□□ 0.73
CDH4P55283 C2orf69P3-201ENST00000565542 1120 ntBASIC19.64■□□□□ 0.73
CDH4P55283 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH4P55283 AC133561.5-201ENST00000635547 218 ntBASIC19.64■□□□□ 0.73
CDH4P55283 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH4P55283 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH4P55283 CYP2D8P-201ENST00000433633 1490 ntBASIC19.64■□□□□ 0.73
CDH4P55283 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH4P55283 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms