Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB3P54753 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB3P54753 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB3P54753 AL157384.1-201ENST00000445995 2473 ntBASIC20.09■□□□□ 0.81
EPHB3P54753 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB3P54753 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB3P54753 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.09■□□□□ 0.81
EPHB3P54753 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.09■□□□□ 0.81
EPHB3P54753 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB3P54753 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.09■□□□□ 0.81
EPHB3P54753 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.09■□□□□ 0.81
EPHB3P54753 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.09■□□□□ 0.81
EPHB3P54753 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
EPHB3P54753 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
EPHB3P54753 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB3P54753 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.09■□□□□ 0.81
EPHB3P54753 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
EPHB3P54753 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB3P54753 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
EPHB3P54753 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB3P54753 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB3P54753 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.08■□□□□ 0.81
EPHB3P54753 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.08■□□□□ 0.81
EPHB3P54753 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB3P54753 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB3P54753 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB3P54753 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.08■□□□□ 0.81
EPHB3P54753 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.08■□□□□ 0.81
EPHB3P54753 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.08■□□□□ 0.81
EPHB3P54753 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.08■□□□□ 0.81
EPHB3P54753 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EPHB3P54753 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
EPHB3P54753 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EPHB3P54753 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
EPHB3P54753 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.07■□□□□ 0.8
EPHB3P54753 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.07■□□□□ 0.8
EPHB3P54753 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.07■□□□□ 0.8
EPHB3P54753 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.07■□□□□ 0.8
EPHB3P54753 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.07■□□□□ 0.8
EPHB3P54753 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.07■□□□□ 0.8
EPHB3P54753 KRT8P45-201ENST00000414328 1447 ntBASIC20.07■□□□□ 0.8
EPHB3P54753 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.07■□□□□ 0.8
EPHB3P54753 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
EPHB3P54753 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.07■□□□□ 0.8
EPHB3P54753 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EPHB3P54753 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB3P54753 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB3P54753 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB3P54753 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB3P54753 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB3P54753 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.06■□□□□ 0.8
EPHB3P54753 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EPHB3P54753 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
EPHB3P54753 TSPY21P-201ENST00000433481 731 ntBASIC20.06■□□□□ 0.8
EPHB3P54753 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.06■□□□□ 0.8
EPHB3P54753 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.06■□□□□ 0.8
EPHB3P54753 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
EPHB3P54753 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.06■□□□□ 0.8
EPHB3P54753 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB3P54753 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB3P54753 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EPHB3P54753 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB3P54753 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EPHB3P54753 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EPHB3P54753 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.05■□□□□ 0.8
EPHB3P54753 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHB3P54753 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.05■□□□□ 0.8
EPHB3P54753 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHB3P54753 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHB3P54753 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHB3P54753 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHB3P54753 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHB3P54753 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.05■□□□□ 0.8
EPHB3P54753 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.05■□□□□ 0.8
EPHB3P54753 AP000523.1-201ENST00000398242 1049 ntBASIC20.05■□□□□ 0.8
EPHB3P54753 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EPHB3P54753 HOMER2P1-201ENST00000455653 964 ntBASIC20.05■□□□□ 0.8
EPHB3P54753 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.05■□□□□ 0.8
EPHB3P54753 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.05■□□□□ 0.8
EPHB3P54753 AL023973.1-201ENST00000624619 620 ntBASIC20.05■□□□□ 0.8
EPHB3P54753 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.05■□□□□ 0.8
EPHB3P54753 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.05■□□□□ 0.8
EPHB3P54753 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.05■□□□□ 0.8
EPHB3P54753 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms