Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
NUBP1P53384 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.14■□□□□ 0.65
NUBP1P53384 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.14■□□□□ 0.65
NUBP1P53384 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NUBP1P53384 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.14■□□□□ 0.65
NUBP1P53384 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.14■□□□□ 0.65
NUBP1P53384 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUBP1P53384 KRT8P11-201ENST00000409686 1436 ntBASIC19.14■□□□□ 0.65
NUBP1P53384 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUBP1P53384 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUBP1P53384 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUBP1P53384 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.14■□□□□ 0.65
NUBP1P53384 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NUBP1P53384 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUBP1P53384 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUBP1P53384 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUBP1P53384 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUBP1P53384 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUBP1P53384 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUBP1P53384 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.13■□□□□ 0.65
NUBP1P53384 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.13■□□□□ 0.65
NUBP1P53384 AC074051.2-201ENST00000565115 352 ntBASIC19.13■□□□□ 0.65
NUBP1P53384 AL136038.4-201ENST00000603606 1261 ntBASIC19.13■□□□□ 0.65
NUBP1P53384 AC140113.2-201ENST00000604370 208 ntBASIC19.13■□□□□ 0.65
NUBP1P53384 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NUBP1P53384 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUBP1P53384 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUBP1P53384 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.13■□□□□ 0.65
NUBP1P53384 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUBP1P53384 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NUBP1P53384 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUBP1P53384 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUBP1P53384 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUBP1P53384 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUBP1P53384 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUBP1P53384 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUBP1P53384 DPP3P2-201ENST00000416030 1696 ntBASIC19.12■□□□□ 0.65
NUBP1P53384 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.12■□□□□ 0.65
NUBP1P53384 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUBP1P53384 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUBP1P53384 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.12■□□□□ 0.65
NUBP1P53384 AKR1C7P-201ENST00000305623 895 ntBASIC19.12■□□□□ 0.65
NUBP1P53384 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUBP1P53384 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUBP1P53384 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
NUBP1P53384 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC19.12■□□□□ 0.65
NUBP1P53384 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.12■□□□□ 0.65
NUBP1P53384 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.12■□□□□ 0.65
NUBP1P53384 AC138894.3-201ENST00000603787 634 ntBASIC19.12■□□□□ 0.65
NUBP1P53384 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
NUBP1P53384 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.12■□□□□ 0.65
NUBP1P53384 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC19.12■□□□□ 0.65
NUBP1P53384 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
NUBP1P53384 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NUBP1P53384 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NUBP1P53384 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUBP1P53384 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.11■□□□□ 0.65
NUBP1P53384 AC242852.2-201ENST00000615738 1807 ntBASIC19.11■□□□□ 0.65
NUBP1P53384 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
NUBP1P53384 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NUBP1P53384 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.11■□□□□ 0.65
NUBP1P53384 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.11■□□□□ 0.65
NUBP1P53384 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NUBP1P53384 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.11■□□□□ 0.65
NUBP1P53384 HSFY1P1-201ENST00000423928 1178 ntBASIC19.11■□□□□ 0.65
NUBP1P53384 PMS2P2-201ENST00000425039 1128 ntBASIC19.11■□□□□ 0.65
NUBP1P53384 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.11■□□□□ 0.65
NUBP1P53384 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
NUBP1P53384 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.11■□□□□ 0.65
NUBP1P53384 SLC25A1P1-201ENST00000528351 927 ntBASIC19.11■□□□□ 0.65
NUBP1P53384 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.11■□□□□ 0.65
NUBP1P53384 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.11■□□□□ 0.65
NUBP1P53384 AC105148.1-201ENST00000604961 409 ntBASIC19.11■□□□□ 0.65
NUBP1P53384 AC024243.1-201ENST00000609234 778 ntBASIC19.11■□□□□ 0.65
NUBP1P53384 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 AL109620.1-201ENST00000618738 1197 ntBASIC19.11■□□□□ 0.65
NUBP1P53384 AC009452.1-201ENST00000640823 606 ntBASIC19.11■□□□□ 0.65
NUBP1P53384 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.11■□□□□ 0.65
NUBP1P53384 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
NUBP1P53384 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
NUBP1P53384 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.11■□□□□ 0.65
NUBP1P53384 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUBP1P53384 AC005229.4-201ENST00000610085 2198 ntBASIC19.1■□□□□ 0.65
NUBP1P53384 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.1■□□□□ 0.65
NUBP1P53384 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.1■□□□□ 0.65
NUBP1P53384 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms