Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP11P51784 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USP11P51784 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
USP11P51784 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
USP11P51784 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 AL032819.2-201ENST00000624543 2162 ntBASIC21.75■■□□□ 1.07
USP11P51784 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 AC007952.6-201ENST00000573168 2673 ntBASIC21.75■■□□□ 1.07
USP11P51784 AC003957.1-201ENST00000625108 2673 ntBASIC21.75■■□□□ 1.07
USP11P51784 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
USP11P51784 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
USP11P51784 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.75■■□□□ 1.07
USP11P51784 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
USP11P51784 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
USP11P51784 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
USP11P51784 TSPY23P-201ENST00000440136 739 ntBASIC21.75■■□□□ 1.07
USP11P51784 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.75■■□□□ 1.07
USP11P51784 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.75■■□□□ 1.07
USP11P51784 SLC25A1P4-201ENST00000567977 778 ntBASIC21.75■■□□□ 1.07
USP11P51784 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.75■■□□□ 1.07
USP11P51784 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
USP11P51784 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.75■■□□□ 1.07
USP11P51784 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USP11P51784 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.74■■□□□ 1.07
USP11P51784 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
USP11P51784 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.74■■□□□ 1.07
USP11P51784 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 MMP23A-201ENST00000234610 1017 ntBASIC21.74■■□□□ 1.07
USP11P51784 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 MIR1238-201ENST00000408483 83 ntBASIC21.74■■□□□ 1.07
USP11P51784 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.74■■□□□ 1.07
USP11P51784 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.74■■□□□ 1.07
USP11P51784 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.74■■□□□ 1.07
USP11P51784 TEX21P-204ENST00000641479 1693 ntBASIC21.74■■□□□ 1.07
USP11P51784 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
USP11P51784 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
USP11P51784 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USP11P51784 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP11P51784 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USP11P51784 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP11P51784 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
USP11P51784 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP11P51784 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.73■■□□□ 1.07
USP11P51784 CRYGFP-201ENST00000418459 633 ntBASIC21.73■■□□□ 1.07
USP11P51784 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USP11P51784 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.73■■□□□ 1.07
USP11P51784 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.73■■□□□ 1.07
USP11P51784 AC073912.3-201ENST00000624414 853 ntBASIC21.73■■□□□ 1.07
USP11P51784 AC005332.7-201ENST00000614046 2005 ntBASIC21.73■■□□□ 1.07
USP11P51784 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
USP11P51784 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
USP11P51784 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.73■■□□□ 1.07
USP11P51784 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP11P51784 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP11P51784 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP11P51784 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP11P51784 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP11P51784 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.72■■□□□ 1.07
USP11P51784 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP11P51784 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP11P51784 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.72■■□□□ 1.07
USP11P51784 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
USP11P51784 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
USP11P51784 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.72■■□□□ 1.07
USP11P51784 AC141586.3-201ENST00000562166 1838 ntBASIC21.72■■□□□ 1.07
USP11P51784 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP11P51784 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.72■■□□□ 1.07
USP11P51784 MFAP1P1-201ENST00000442257 1255 ntBASIC21.72■■□□□ 1.07
USP11P51784 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.72■■□□□ 1.07
USP11P51784 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.72■■□□□ 1.07
USP11P51784 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP11P51784 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.72■■□□□ 1.07
USP11P51784 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USP11P51784 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP11P51784 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms