Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CCNFP41002 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCNFP41002 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
CCNFP41002 RPS2P52-201ENST00000469610 820 ntBASIC19.33■□□□□ 0.68
CCNFP41002 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.33■□□□□ 0.68
CCNFP41002 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.33■□□□□ 0.68
CCNFP41002 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCNFP41002 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.33■□□□□ 0.68
CCNFP41002 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCNFP41002 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.33■□□□□ 0.68
CCNFP41002 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNFP41002 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCNFP41002 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
CCNFP41002 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCNFP41002 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNFP41002 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.32■□□□□ 0.68
CCNFP41002 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNFP41002 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCNFP41002 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.32■□□□□ 0.68
CCNFP41002 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCNFP41002 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNFP41002 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
CCNFP41002 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCNFP41002 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCNFP41002 AC026366.1-201ENST00000488803 879 ntBASIC19.32■□□□□ 0.68
CCNFP41002 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
CCNFP41002 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCNFP41002 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.32■□□□□ 0.68
CCNFP41002 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.32■□□□□ 0.68
CCNFP41002 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNFP41002 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNFP41002 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.32■□□□□ 0.68
CCNFP41002 AC009113.1-201ENST00000570267 2443 ntBASIC19.32■□□□□ 0.68
CCNFP41002 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNFP41002 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCNFP41002 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.31■□□□□ 0.68
CCNFP41002 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCNFP41002 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCNFP41002 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCNFP41002 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCNFP41002 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCNFP41002 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCNFP41002 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCNFP41002 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCNFP41002 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.31■□□□□ 0.68
CCNFP41002 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
CCNFP41002 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCNFP41002 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.31■□□□□ 0.68
CCNFP41002 POM121L13P-201ENST00000422362 380 ntBASIC19.31■□□□□ 0.68
CCNFP41002 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.31■□□□□ 0.68
CCNFP41002 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCNFP41002 AL121906.2-201ENST00000621597 723 ntBASIC19.31■□□□□ 0.68
CCNFP41002 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCNFP41002 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.31■□□□□ 0.68
CCNFP41002 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.31■□□□□ 0.68
CCNFP41002 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.31■□□□□ 0.68
CCNFP41002 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.31■□□□□ 0.68
CCNFP41002 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.31■□□□□ 0.68
CCNFP41002 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCNFP41002 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.3■□□□□ 0.68
CCNFP41002 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.3■□□□□ 0.68
CCNFP41002 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.3■□□□□ 0.68
CCNFP41002 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.3■□□□□ 0.68
CCNFP41002 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CCNFP41002 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.3■□□□□ 0.68
CCNFP41002 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.3■□□□□ 0.68
CCNFP41002 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.3■□□□□ 0.68
CCNFP41002 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.3■□□□□ 0.68
CCNFP41002 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.3■□□□□ 0.68
CCNFP41002 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCNFP41002 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCNFP41002 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.3■□□□□ 0.68
CCNFP41002 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.3■□□□□ 0.68
CCNFP41002 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.29■□□□□ 0.68
CCNFP41002 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 LTB4R2-202ENST00000528054 3092 ntBASIC19.29■□□□□ 0.68
CCNFP41002 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.29■□□□□ 0.68
CCNFP41002 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
CCNFP41002 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCNFP41002 KRT17P3-201ENST00000420566 1262 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms