Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SOX6P35712 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 FER1L4-210ENST00000615531 5998 ntBASIC17.23■□□□□ 0.35
SOX6P35712 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.23■□□□□ 0.35
SOX6P35712 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.23■□□□□ 0.35
SOX6P35712 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.23■□□□□ 0.35
SOX6P35712 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.23■□□□□ 0.35
SOX6P35712 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX6P35712 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SOX6P35712 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.22■□□□□ 0.35
SOX6P35712 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.22■□□□□ 0.35
SOX6P35712 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.22■□□□□ 0.35
SOX6P35712 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SOX6P35712 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.22■□□□□ 0.35
SOX6P35712 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.22■□□□□ 0.35
SOX6P35712 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.22■□□□□ 0.35
SOX6P35712 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.22■□□□□ 0.35
SOX6P35712 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.22■□□□□ 0.35
SOX6P35712 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX6P35712 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.21■□□□□ 0.35
SOX6P35712 AC019069.1-201ENST00000610008 1333 ntBASIC17.21■□□□□ 0.35
SOX6P35712 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SOX6P35712 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SOX6P35712 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SOX6P35712 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SOX6P35712 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 IRS3P-201ENST00000223076 1006 ntBASIC17.21■□□□□ 0.35
SOX6P35712 MIR572-201ENST00000384983 95 ntBASIC17.21■□□□□ 0.35
SOX6P35712 PGM5P4-201ENST00000421970 445 ntBASIC17.21■□□□□ 0.35
SOX6P35712 AC007322.3-201ENST00000426526 701 ntBASIC17.21■□□□□ 0.35
SOX6P35712 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.21■□□□□ 0.35
SOX6P35712 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.21■□□□□ 0.35
SOX6P35712 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.21■□□□□ 0.35
SOX6P35712 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.21■□□□□ 0.35
SOX6P35712 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SOX6P35712 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 ABALON-201ENST00000629058 1903 ntBASIC17.21■□□□□ 0.35
SOX6P35712 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.21■□□□□ 0.35
SOX6P35712 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX6P35712 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
SOX6P35712 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SOX6P35712 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.21■□□□□ 0.34
SOX6P35712 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX6P35712 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX6P35712 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX6P35712 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX6P35712 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SOX6P35712 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX6P35712 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX6P35712 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
SOX6P35712 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SOX6P35712 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX6P35712 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms