Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP24386 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.96■□□□□ 0.47
CHMP24386 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP24386 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMP24386 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMP24386 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.96■□□□□ 0.47
CHMP24386 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP24386 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP24386 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CHMP24386 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHMP24386 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CHMP24386 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
CHMP24386 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.95■□□□□ 0.46
CHMP24386 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHMP24386 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CHMP24386 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.95■□□□□ 0.46
CHMP24386 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHMP24386 AC133681.1-201ENST00000465482 601 ntBASIC17.95■□□□□ 0.46
CHMP24386 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.95■□□□□ 0.46
CHMP24386 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP24386 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.95■□□□□ 0.46
CHMP24386 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.95■□□□□ 0.46
CHMP24386 FAM197Y4-202ENST00000622692 608 ntBASIC17.95■□□□□ 0.46
CHMP24386 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.95■□□□□ 0.46
CHMP24386 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
CHMP24386 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP24386 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CHMP24386 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.94■□□□□ 0.46
CHMP24386 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP24386 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.94■□□□□ 0.46
CHMP24386 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.94■□□□□ 0.46
CHMP24386 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHMP24386 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CHMP24386 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP24386 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP24386 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CHMP24386 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 AC093827.2-201ENST00000512654 315 ntBASIC17.94■□□□□ 0.46
CHMP24386 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.94■□□□□ 0.46
CHMP24386 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CHMP24386 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP24386 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 AC138932.1-201ENST00000534164 6830 ntBASIC17.94■□□□□ 0.46
CHMP24386 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CHMP24386 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CHMP24386 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
CHMP24386 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CHMP24386 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP24386 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP24386 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP24386 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP24386 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms