Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CD58P19256 AC066615.1-201ENST00000640911 628 ntBASIC20.65■□□□□ 0.9
CD58P19256 AL049637.2-201ENST00000641778 930 ntBASIC20.65■□□□□ 0.9
CD58P19256 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.65■□□□□ 0.9
CD58P19256 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.65■□□□□ 0.9
CD58P19256 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.65■□□□□ 0.9
CD58P19256 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD58P19256 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD58P19256 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CD58P19256 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD58P19256 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD58P19256 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD58P19256 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD58P19256 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD58P19256 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD58P19256 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD58P19256 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CD58P19256 AC093827.2-201ENST00000512654 315 ntBASIC20.64■□□□□ 0.89
CD58P19256 CD177P1-201ENST00000606252 935 ntBASIC20.64■□□□□ 0.89
CD58P19256 AC113410.3-201ENST00000623366 203 ntBASIC20.64■□□□□ 0.89
CD58P19256 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CD58P19256 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CD58P19256 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD58P19256 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CD58P19256 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CD58P19256 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD58P19256 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD58P19256 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.64■□□□□ 0.89
CD58P19256 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.63■□□□□ 0.89
CD58P19256 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CD58P19256 AC005332.7-201ENST00000614046 2005 ntBASIC20.63■□□□□ 0.89
CD58P19256 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD58P19256 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD58P19256 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CD58P19256 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD58P19256 MIR718-201ENST00000390190 70 ntBASIC20.63■□□□□ 0.89
CD58P19256 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.63■□□□□ 0.89
CD58P19256 AC004980.1-204ENST00000429707 299 ntBASIC20.63■□□□□ 0.89
CD58P19256 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD58P19256 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD58P19256 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.63■□□□□ 0.89
CD58P19256 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.63■□□□□ 0.89
CD58P19256 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.63■□□□□ 0.89
CD58P19256 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.63■□□□□ 0.89
CD58P19256 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.63■□□□□ 0.89
CD58P19256 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.63■□□□□ 0.89
CD58P19256 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD58P19256 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD58P19256 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.63■□□□□ 0.89
CD58P19256 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.63■□□□□ 0.89
CD58P19256 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD58P19256 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD58P19256 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CD58P19256 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD58P19256 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.62■□□□□ 0.89
CD58P19256 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD58P19256 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CD58P19256 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CD58P19256 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD58P19256 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.62■□□□□ 0.89
CD58P19256 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CD58P19256 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD58P19256 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.62■□□□□ 0.89
CD58P19256 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.62■□□□□ 0.89
CD58P19256 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.62■□□□□ 0.89
CD58P19256 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.62■□□□□ 0.89
CD58P19256 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.62■□□□□ 0.89
CD58P19256 AC131212.4-201ENST00000623606 975 ntBASIC20.62■□□□□ 0.89
CD58P19256 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.62■□□□□ 0.89
CD58P19256 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD58P19256 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD58P19256 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CD58P19256 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.62■□□□□ 0.89
CD58P19256 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CD58P19256 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD58P19256 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD58P19256 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD58P19256 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
CD58P19256 AC120498.9-201ENST00000339021 3867 ntBASIC20.61■□□□□ 0.89
CD58P19256 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD58P19256 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD58P19256 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.61■□□□□ 0.89
CD58P19256 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD58P19256 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.61■□□□□ 0.89
CD58P19256 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.61■□□□□ 0.89
CD58P19256 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.61■□□□□ 0.89
CD58P19256 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD58P19256 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD58P19256 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD58P19256 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.61■□□□□ 0.89
CD58P19256 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.61■□□□□ 0.89
CD58P19256 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CD58P19256 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.61■□□□□ 0.89
CD58P19256 AP001412.1-201ENST00000608405 714 ntBASIC20.61■□□□□ 0.89
CD58P19256 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD58P19256 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD58P19256 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD58P19256 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms