Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC026471.1-201ENST00000564629 3026 ntBASIC19.18■□□□□ 0.66
XRCC1P18887 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC1P18887 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC1P18887 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC1P18887 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
XRCC1P18887 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC1P18887 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.17■□□□□ 0.66
XRCC1P18887 YBX1P10-201ENST00000444752 975 ntBASIC19.17■□□□□ 0.66
XRCC1P18887 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.17■□□□□ 0.66
XRCC1P18887 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.17■□□□□ 0.66
XRCC1P18887 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.17■□□□□ 0.66
XRCC1P18887 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC1P18887 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC1P18887 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
XRCC1P18887 Z82202.1-201ENST00000623446 1880 ntBASIC19.17■□□□□ 0.66
XRCC1P18887 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
XRCC1P18887 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.17■□□□□ 0.66
XRCC1P18887 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC1P18887 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC1P18887 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC1P18887 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC1P18887 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC1P18887 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.17■□□□□ 0.66
XRCC1P18887 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.16■□□□□ 0.66
XRCC1P18887 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.16■□□□□ 0.66
XRCC1P18887 TSPY7P-201ENST00000431358 1114 ntBASIC19.16■□□□□ 0.66
XRCC1P18887 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.16■□□□□ 0.66
XRCC1P18887 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.16■□□□□ 0.66
XRCC1P18887 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.16■□□□□ 0.66
XRCC1P18887 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.16■□□□□ 0.66
XRCC1P18887 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
XRCC1P18887 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.16■□□□□ 0.66
XRCC1P18887 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.16■□□□□ 0.66
XRCC1P18887 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.16■□□□□ 0.66
XRCC1P18887 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
XRCC1P18887 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
XRCC1P18887 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
XRCC1P18887 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.16■□□□□ 0.66
XRCC1P18887 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
XRCC1P18887 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC1P18887 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
XRCC1P18887 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
XRCC1P18887 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.15■□□□□ 0.66
XRCC1P18887 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.15■□□□□ 0.66
XRCC1P18887 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.15■□□□□ 0.66
XRCC1P18887 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.15■□□□□ 0.66
XRCC1P18887 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.15■□□□□ 0.66
XRCC1P18887 AC073195.1-201ENST00000607241 877 ntBASIC19.15■□□□□ 0.66
XRCC1P18887 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
XRCC1P18887 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.15■□□□□ 0.66
XRCC1P18887 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.15■□□□□ 0.66
XRCC1P18887 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
XRCC1P18887 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.15■□□□□ 0.66
XRCC1P18887 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
XRCC1P18887 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC1P18887 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
XRCC1P18887 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC1P18887 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC1P18887 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC1P18887 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC1P18887 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC1P18887 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
XRCC1P18887 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
XRCC1P18887 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.14■□□□□ 0.65
XRCC1P18887 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC1P18887 KRT18P16-201ENST00000510337 1294 ntBASIC19.14■□□□□ 0.65
XRCC1P18887 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.14■□□□□ 0.65
XRCC1P18887 MIR4785-201ENST00000585005 73 ntBASIC19.14■□□□□ 0.65
XRCC1P18887 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.14■□□□□ 0.65
XRCC1P18887 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC1P18887 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC1P18887 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC1P18887 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC1P18887 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms