Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CTLA4P16410 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTLA4P16410 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CTLA4P16410 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CTLA4P16410 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.07■□□□□ 0.32
CTLA4P16410 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CTLA4P16410 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.07■□□□□ 0.32
CTLA4P16410 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.07■□□□□ 0.32
CTLA4P16410 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.07■□□□□ 0.32
CTLA4P16410 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.07■□□□□ 0.32
CTLA4P16410 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.07■□□□□ 0.32
CTLA4P16410 AC006333.2-201ENST00000607957 2099 ntBASIC17.07■□□□□ 0.32
CTLA4P16410 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CTLA4P16410 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 IRX1P1-201ENST00000438849 1838 ntBASIC17.07■□□□□ 0.32
CTLA4P16410 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CTLA4P16410 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTLA4P16410 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.07■□□□□ 0.32
CTLA4P16410 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.07■□□□□ 0.32
CTLA4P16410 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.07■□□□□ 0.32
CTLA4P16410 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTLA4P16410 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CTLA4P16410 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CTLA4P16410 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.06■□□□□ 0.32
CTLA4P16410 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.06■□□□□ 0.32
CTLA4P16410 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.06■□□□□ 0.32
CTLA4P16410 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.06■□□□□ 0.32
CTLA4P16410 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.06■□□□□ 0.32
CTLA4P16410 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 C1QL1P1-201ENST00000568105 661 ntBASIC17.06■□□□□ 0.32
CTLA4P16410 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.06■□□□□ 0.32
CTLA4P16410 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.06■□□□□ 0.32
CTLA4P16410 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CTLA4P16410 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CTLA4P16410 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CTLA4P16410 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTLA4P16410 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.06■□□□□ 0.32
CTLA4P16410 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.06■□□□□ 0.32
CTLA4P16410 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTLA4P16410 CROCCP3-202ENST00000420820 1947 ntBASIC17.06■□□□□ 0.32
CTLA4P16410 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTLA4P16410 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CTLA4P16410 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTLA4P16410 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTLA4P16410 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTLA4P16410 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
CTLA4P16410 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CTLA4P16410 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.05■□□□□ 0.32
CTLA4P16410 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.05■□□□□ 0.32
CTLA4P16410 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTLA4P16410 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
CTLA4P16410 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.05■□□□□ 0.32
CTLA4P16410 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.05■□□□□ 0.32
CTLA4P16410 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.05■□□□□ 0.32
CTLA4P16410 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.05■□□□□ 0.32
CTLA4P16410 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.05■□□□□ 0.32
CTLA4P16410 AC004264.1-201ENST00000608354 794 ntBASIC17.05■□□□□ 0.32
CTLA4P16410 HLA-A-209ENST00000638375 975 ntBASIC17.05■□□□□ 0.32
CTLA4P16410 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.05■□□□□ 0.32
CTLA4P16410 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTLA4P16410 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.05■□□□□ 0.32
CTLA4P16410 FP475955.4-201ENST00000623131 1990 ntBASIC17.05■□□□□ 0.32
CTLA4P16410 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTLA4P16410 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CTLA4P16410 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTLA4P16410 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.05■□□□□ 0.32
CTLA4P16410 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CTLA4P16410 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.04■□□□□ 0.32
CTLA4P16410 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTLA4P16410 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTLA4P16410 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTLA4P16410 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CTLA4P16410 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTLA4P16410 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTLA4P16410 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTLA4P16410 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTLA4P16410 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTLA4P16410 ESRRAP1-201ENST00000400596 1257 ntBASIC17.04■□□□□ 0.32
CTLA4P16410 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.04■□□□□ 0.32
CTLA4P16410 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms