Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DOBP13765 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DOBP13765 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DOBP13765 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DOBP13765 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DOBP13765 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DOBP13765 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DOBP13765 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DOBP13765 AC141586.3-201ENST00000562166 1838 ntBASIC17.24■□□□□ 0.35
HLA-DOBP13765 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 AL049812.1-201ENST00000432563 2267 ntBASIC17.23■□□□□ 0.35
HLA-DOBP13765 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DOBP13765 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DOBP13765 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DOBP13765 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DOBP13765 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 PRORSD1P-201ENST00000295112 541 ntBASIC17.23■□□□□ 0.35
HLA-DOBP13765 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DOBP13765 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DOBP13765 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DOBP13765 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DOBP13765 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DOBP13765 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 AL161938.1-201ENST00000569833 2180 ntBASIC17.22■□□□□ 0.35
HLA-DOBP13765 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
HLA-DOBP13765 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
HLA-DOBP13765 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DOBP13765 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HLA-DOBP13765 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HLA-DOBP13765 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.22■□□□□ 0.35
HLA-DOBP13765 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DOBP13765 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DOBP13765 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DOBP13765 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DOBP13765 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DOBP13765 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DOBP13765 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DOBP13765 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 AL359736.2-201ENST00000621992 437 ntBASIC17.21■□□□□ 0.35
HLA-DOBP13765 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DOBP13765 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 AC120498.9-201ENST00000339021 3867 ntBASIC17.21■□□□□ 0.35
HLA-DOBP13765 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DOBP13765 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DOBP13765 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DOBP13765 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DOBP13765 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DOBP13765 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DOBP13765 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DOBP13765 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.21■□□□□ 0.34
HLA-DOBP13765 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
HLA-DOBP13765 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DOBP13765 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DOBP13765 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DOBP13765 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DOBP13765 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms