Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBCP0CG48 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.86■□□□□ 0.29
UBCP0CG48 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBCP0CG48 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBCP0CG48 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
UBCP0CG48 AP006587.1-201ENST00000534129 1502 ntBASIC16.86■□□□□ 0.29
UBCP0CG48 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
UBCP0CG48 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 AC020916.1-201ENST00000587762 1774 ntBASIC16.85■□□□□ 0.29
UBCP0CG48 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
UBCP0CG48 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.85■□□□□ 0.29
UBCP0CG48 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.85■□□□□ 0.29
UBCP0CG48 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.85■□□□□ 0.29
UBCP0CG48 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.85■□□□□ 0.29
UBCP0CG48 RPS2P52-201ENST00000469610 820 ntBASIC16.85■□□□□ 0.29
UBCP0CG48 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
UBCP0CG48 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.85■□□□□ 0.29
UBCP0CG48 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
UBCP0CG48 KRT8P8-201ENST00000434750 1448 ntBASIC16.85■□□□□ 0.29
UBCP0CG48 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.85■□□□□ 0.29
UBCP0CG48 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.85■□□□□ 0.29
UBCP0CG48 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.85■□□□□ 0.29
UBCP0CG48 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBCP0CG48 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UBCP0CG48 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UBCP0CG48 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBCP0CG48 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.84■□□□□ 0.29
UBCP0CG48 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBCP0CG48 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UBCP0CG48 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBCP0CG48 AC006333.2-201ENST00000607957 2099 ntBASIC16.84■□□□□ 0.29
UBCP0CG48 AL049812.1-201ENST00000432563 2267 ntBASIC16.84■□□□□ 0.29
UBCP0CG48 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBCP0CG48 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.84■□□□□ 0.29
UBCP0CG48 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.84■□□□□ 0.29
UBCP0CG48 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.84■□□□□ 0.29
UBCP0CG48 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBCP0CG48 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.84■□□□□ 0.29
UBCP0CG48 AC006557.6-201ENST00000623071 864 ntBASIC16.84■□□□□ 0.29
UBCP0CG48 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBCP0CG48 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBCP0CG48 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
UBCP0CG48 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBCP0CG48 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.84■□□□□ 0.29
UBCP0CG48 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UBCP0CG48 AC020763.4-201ENST00000623414 4170 ntBASIC16.84■□□□□ 0.29
UBCP0CG48 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBCP0CG48 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBCP0CG48 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBCP0CG48 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBCP0CG48 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.84■□□□□ 0.29
UBCP0CG48 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.83■□□□□ 0.29
UBCP0CG48 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.83■□□□□ 0.29
UBCP0CG48 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBCP0CG48 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBCP0CG48 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBCP0CG48 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBCP0CG48 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBCP0CG48 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBCP0CG48 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBCP0CG48 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UBCP0CG48 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBCP0CG48 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBCP0CG48 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBCP0CG48 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBCP0CG48 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.83■□□□□ 0.28
UBCP0CG48 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBCP0CG48 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.83■□□□□ 0.28
UBCP0CG48 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBCP0CG48 AC104417.2-201ENST00000562989 1793 ntBASIC16.83■□□□□ 0.28
UBCP0CG48 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.83■□□□□ 0.28
UBCP0CG48 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UBCP0CG48 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
UBCP0CG48 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.83■□□□□ 0.28
UBCP0CG48 AL121832.2-201ENST00000610979 668 ntBASIC16.83■□□□□ 0.28
UBCP0CG48 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBCP0CG48 AC124283.5-201ENST00000624661 1809 ntBASIC16.83■□□□□ 0.28
UBCP0CG48 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBCP0CG48 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.82■□□□□ 0.28
UBCP0CG48 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.82■□□□□ 0.28
UBCP0CG48 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBCP0CG48 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBCP0CG48 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBCP0CG48 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.82■□□□□ 0.28
UBCP0CG48 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms