Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC172P0C7W6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.77■□□□□ 0.91
CCDC172P0C7W6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 AC092666.2-201ENST00000613287 246 ntBASIC20.76■□□□□ 0.91
CCDC172P0C7W6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC172P0C7W6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 AC104417.2-201ENST00000562989 1793 ntBASIC20.75■□□□□ 0.91
CCDC172P0C7W6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 TEX21P-204ENST00000641479 1693 ntBASIC20.75■□□□□ 0.91
CCDC172P0C7W6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 AC142086.2-201ENST00000569753 217 ntBASIC20.75■□□□□ 0.91
CCDC172P0C7W6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC172P0C7W6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 LTB4R2-202ENST00000528054 3092 ntBASIC20.74■□□□□ 0.91
CCDC172P0C7W6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC172P0C7W6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 UNC93B4-201ENST00000505679 747 ntBASIC20.73■□□□□ 0.91
CCDC172P0C7W6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC172P0C7W6 PRKY-204ENST00000533551 1019 ntBASIC20.73■□□□□ 0.91
CCDC172P0C7W6 AC098934.4-201ENST00000564127 592 ntBASIC20.73■□□□□ 0.91
CCDC172P0C7W6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms