Protein–RNA interactions for Protein: P08118

MSMB, Beta-microseminoprotein, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSMBP08118 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MSMBP08118 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.72■□□□□ 0.11
MSMBP08118 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSMBP08118 AC092667.1-201ENST00000434301 2586 ntBASIC15.72■□□□□ 0.11
MSMBP08118 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSMBP08118 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.72■□□□□ 0.11
MSMBP08118 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.72■□□□□ 0.11
MSMBP08118 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.72■□□□□ 0.11
MSMBP08118 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSMBP08118 AL671277.2-201ENST00000458060 996 ntBASIC15.72■□□□□ 0.11
MSMBP08118 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.72■□□□□ 0.11
MSMBP08118 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.72■□□□□ 0.11
MSMBP08118 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.72■□□□□ 0.11
MSMBP08118 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.72■□□□□ 0.11
MSMBP08118 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
MSMBP08118 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.72■□□□□ 0.11
MSMBP08118 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.72■□□□□ 0.11
MSMBP08118 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.72■□□□□ 0.11
MSMBP08118 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSMBP08118 NEK4P2-201ENST00000580004 1012 ntBASIC15.72■□□□□ 0.11
MSMBP08118 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MSMBP08118 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.72■□□□□ 0.11
MSMBP08118 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MSMBP08118 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
MSMBP08118 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.72■□□□□ 0.11
MSMBP08118 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
MSMBP08118 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.72■□□□□ 0.11
MSMBP08118 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSMBP08118 AC104417.2-201ENST00000562989 1793 ntBASIC15.72■□□□□ 0.11
MSMBP08118 ZNF815P-204ENST00000434898 1737 ntBASIC15.71■□□□□ 0.11
MSMBP08118 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
MSMBP08118 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.71■□□□□ 0.11
MSMBP08118 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
MSMBP08118 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
MSMBP08118 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.71■□□□□ 0.11
MSMBP08118 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.71■□□□□ 0.11
MSMBP08118 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.71■□□□□ 0.11
MSMBP08118 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.71■□□□□ 0.11
MSMBP08118 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.71■□□□□ 0.11
MSMBP08118 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.71■□□□□ 0.11
MSMBP08118 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
MSMBP08118 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.71■□□□□ 0.11
MSMBP08118 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.71■□□□□ 0.11
MSMBP08118 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.71■□□□□ 0.11
MSMBP08118 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSMBP08118 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.71■□□□□ 0.11
MSMBP08118 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MSMBP08118 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MSMBP08118 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.71■□□□□ 0.1
MSMBP08118 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MSMBP08118 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
MSMBP08118 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
MSMBP08118 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MSMBP08118 TSPY21P-201ENST00000433481 731 ntBASIC15.7■□□□□ 0.1
MSMBP08118 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 AC009947.2-201ENST00000444014 672 ntBASIC15.7■□□□□ 0.1
MSMBP08118 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.7■□□□□ 0.1
MSMBP08118 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.7■□□□□ 0.1
MSMBP08118 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.7■□□□□ 0.1
MSMBP08118 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.7■□□□□ 0.1
MSMBP08118 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.7■□□□□ 0.1
MSMBP08118 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
MSMBP08118 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
MSMBP08118 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.7■□□□□ 0.1
MSMBP08118 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MSMBP08118 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.7■□□□□ 0.1
MSMBP08118 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MSMBP08118 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.69■□□□□ 0.1
MSMBP08118 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSMBP08118 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSMBP08118 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.69■□□□□ 0.1
MSMBP08118 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MSMBP08118 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MSMBP08118 PCED1CP-201ENST00000419887 785 ntBASIC15.69■□□□□ 0.1
MSMBP08118 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms