Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.26■□□□□ 0.99
CD4P01730 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.26■□□□□ 0.99
CD4P01730 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD4P01730 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
CD4P01730 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CD4P01730 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD4P01730 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.26■□□□□ 0.99
CD4P01730 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.26■□□□□ 0.99
CD4P01730 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD4P01730 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD4P01730 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CD4P01730 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CD4P01730 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.25■□□□□ 0.99
CD4P01730 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.25■□□□□ 0.99
CD4P01730 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.25■□□□□ 0.99
CD4P01730 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.25■□□□□ 0.99
CD4P01730 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.25■□□□□ 0.99
CD4P01730 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.25■□□□□ 0.99
CD4P01730 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.25■□□□□ 0.99
CD4P01730 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD4P01730 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.25■□□□□ 0.99
CD4P01730 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD4P01730 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.25■□□□□ 0.99
CD4P01730 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CD4P01730 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CD4P01730 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD4P01730 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.24■□□□□ 0.99
CD4P01730 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CD4P01730 LINC01311-201ENST00000565162 1445 ntBASIC21.24■□□□□ 0.99
CD4P01730 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
CD4P01730 SPDYE13P-201ENST00000445314 798 ntBASIC21.24■□□□□ 0.99
CD4P01730 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.24■□□□□ 0.99
CD4P01730 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.24■□□□□ 0.99
CD4P01730 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CD4P01730 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.24■□□□□ 0.99
CD4P01730 AC092667.1-201ENST00000434301 2586 ntBASIC21.24■□□□□ 0.99
CD4P01730 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD4P01730 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.23■□□□□ 0.99
CD4P01730 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CD4P01730 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.23■□□□□ 0.99
CD4P01730 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.23■□□□□ 0.99
CD4P01730 AL691432.3-201ENST00000621860 400 ntBASIC21.23■□□□□ 0.99
CD4P01730 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.23■□□□□ 0.99
CD4P01730 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CD4P01730 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CD4P01730 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.23■□□□□ 0.99
CD4P01730 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CD4P01730 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CD4P01730 KRT8P11-201ENST00000409686 1436 ntBASIC21.22■□□□□ 0.99
CD4P01730 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CD4P01730 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD4P01730 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.22■□□□□ 0.99
CD4P01730 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD4P01730 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD4P01730 SPDYE15P-201ENST00000424157 909 ntBASIC21.22■□□□□ 0.99
CD4P01730 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD4P01730 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.22■□□□□ 0.99
CD4P01730 NPAP1P7-201ENST00000613027 823 ntBASIC21.22■□□□□ 0.99
CD4P01730 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.22■□□□□ 0.99
CD4P01730 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD4P01730 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD4P01730 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CD4P01730 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD4P01730 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD4P01730 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD4P01730 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD4P01730 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.22■□□□□ 0.99
CD4P01730 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.21■□□□□ 0.99
CD4P01730 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.21■□□□□ 0.99
CD4P01730 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 LINC01006-201ENST00000333319 2292 ntBASIC21.21■□□□□ 0.99
CD4P01730 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CD4P01730 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.21■□□□□ 0.99
CD4P01730 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms