Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.6■■□□□ 1.05
GGPS1O95749 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.6■■□□□ 1.05
GGPS1O95749 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GGPS1O95749 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GGPS1O95749 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
GGPS1O95749 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GGPS1O95749 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
GGPS1O95749 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GGPS1O95749 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.6■■□□□ 1.05
GGPS1O95749 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
GGPS1O95749 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
GGPS1O95749 AC104417.2-201ENST00000562989 1793 ntBASIC21.59■■□□□ 1.05
GGPS1O95749 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GGPS1O95749 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
GGPS1O95749 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
GGPS1O95749 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GGPS1O95749 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GGPS1O95749 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.59■■□□□ 1.05
GGPS1O95749 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
GGPS1O95749 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
GGPS1O95749 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.59■■□□□ 1.05
GGPS1O95749 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.59■■□□□ 1.05
GGPS1O95749 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
GGPS1O95749 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GGPS1O95749 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GGPS1O95749 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
GGPS1O95749 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
GGPS1O95749 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.59■■□□□ 1.05
GGPS1O95749 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.59■■□□□ 1.05
GGPS1O95749 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GGPS1O95749 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GGPS1O95749 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GGPS1O95749 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.58■■□□□ 1.05
GGPS1O95749 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GGPS1O95749 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GGPS1O95749 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GGPS1O95749 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.58■■□□□ 1.05
GGPS1O95749 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.58■■□□□ 1.05
GGPS1O95749 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.58■■□□□ 1.05
GGPS1O95749 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.58■■□□□ 1.05
GGPS1O95749 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GGPS1O95749 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.58■■□□□ 1.05
GGPS1O95749 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
GGPS1O95749 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.58■■□□□ 1.05
GGPS1O95749 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.58■■□□□ 1.05
GGPS1O95749 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.58■■□□□ 1.05
GGPS1O95749 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.58■■□□□ 1.05
GGPS1O95749 AC139887.4-201ENST00000607877 719 ntBASIC21.58■■□□□ 1.05
GGPS1O95749 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.58■■□□□ 1.05
GGPS1O95749 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
GGPS1O95749 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GGPS1O95749 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.58■■□□□ 1.04
GGPS1O95749 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GGPS1O95749 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GGPS1O95749 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GGPS1O95749 ZNF815P-204ENST00000434898 1737 ntBASIC21.58■■□□□ 1.04
GGPS1O95749 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GGPS1O95749 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.57■■□□□ 1.04
GGPS1O95749 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
GGPS1O95749 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
GGPS1O95749 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.57■■□□□ 1.04
GGPS1O95749 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
GGPS1O95749 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.57■■□□□ 1.04
GGPS1O95749 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.57■■□□□ 1.04
GGPS1O95749 PRSS44-201ENST00000515154 1146 ntBASIC21.57■■□□□ 1.04
GGPS1O95749 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
GGPS1O95749 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.57■■□□□ 1.04
GGPS1O95749 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.57■■□□□ 1.04
GGPS1O95749 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
GGPS1O95749 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
GGPS1O95749 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
GGPS1O95749 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
GGPS1O95749 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GGPS1O95749 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.56■■□□□ 1.04
GGPS1O95749 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.56■■□□□ 1.04
GGPS1O95749 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
GGPS1O95749 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GGPS1O95749 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
GGPS1O95749 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GGPS1O95749 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GGPS1O95749 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GGPS1O95749 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GGPS1O95749 AP003041.3-201ENST00000527151 707 ntBASIC21.56■■□□□ 1.04
GGPS1O95749 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.56■■□□□ 1.04
GGPS1O95749 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
GGPS1O95749 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
GGPS1O95749 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms