Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.05■□□□□ 0.48
SNX4O95219 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SNX4O95219 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNX4O95219 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SNX4O95219 TFP1-202ENST00000475455 1573 ntBASIC18.04■□□□□ 0.48
SNX4O95219 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
SNX4O95219 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX4O95219 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.04■□□□□ 0.48
SNX4O95219 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
SNX4O95219 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SNX4O95219 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SNX4O95219 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX4O95219 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX4O95219 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.04■□□□□ 0.48
SNX4O95219 KRT16P5-201ENST00000455284 522 ntBASIC18.04■□□□□ 0.48
SNX4O95219 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX4O95219 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.04■□□□□ 0.48
SNX4O95219 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX4O95219 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX4O95219 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX4O95219 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SNX4O95219 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.04■□□□□ 0.48
SNX4O95219 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX4O95219 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX4O95219 AL135905.2-201ENST00000584934 1404 ntBASIC18.04■□□□□ 0.48
SNX4O95219 AC093503.3-201ENST00000624917 2352 ntBASIC18.04■□□□□ 0.48
SNX4O95219 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
SNX4O95219 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX4O95219 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SNX4O95219 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SNX4O95219 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX4O95219 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX4O95219 AP006587.1-201ENST00000534129 1502 ntBASIC18.03■□□□□ 0.48
SNX4O95219 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX4O95219 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.03■□□□□ 0.48
SNX4O95219 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX4O95219 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SNX4O95219 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX4O95219 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SNX4O95219 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX4O95219 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNX4O95219 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.03■□□□□ 0.48
SNX4O95219 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SNX4O95219 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SNX4O95219 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SNX4O95219 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX4O95219 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SNX4O95219 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.03■□□□□ 0.48
SNX4O95219 AC008550.1-201ENST00000511500 884 ntBASIC18.03■□□□□ 0.48
SNX4O95219 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.03■□□□□ 0.48
SNX4O95219 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.03■□□□□ 0.48
SNX4O95219 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX4O95219 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX4O95219 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX4O95219 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX4O95219 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX4O95219 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX4O95219 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SNX4O95219 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX4O95219 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
SNX4O95219 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNX4O95219 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNX4O95219 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX4O95219 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX4O95219 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX4O95219 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX4O95219 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX4O95219 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX4O95219 AC093827.2-201ENST00000512654 315 ntBASIC18.02■□□□□ 0.48
SNX4O95219 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX4O95219 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.02■□□□□ 0.48
SNX4O95219 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNX4O95219 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX4O95219 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX4O95219 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX4O95219 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SNX4O95219 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
SNX4O95219 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.02■□□□□ 0.47
SNX4O95219 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX4O95219 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX4O95219 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX4O95219 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SNX4O95219 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.02■□□□□ 0.47
SNX4O95219 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX4O95219 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.47
SNX4O95219 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX4O95219 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.01■□□□□ 0.47
SNX4O95219 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX4O95219 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SNX4O95219 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.01■□□□□ 0.47
SNX4O95219 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.01■□□□□ 0.47
SNX4O95219 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SNX4O95219 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX4O95219 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNX4O95219 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.01■□□□□ 0.47
SNX4O95219 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX4O95219 AP001271.2-201ENST00000624018 1556 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms