Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
UPK1BO75841 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
UPK1BO75841 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 AC004987.1-201ENST00000428627 508 ntBASIC16.79■□□□□ 0.28
UPK1BO75841 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.79■□□□□ 0.28
UPK1BO75841 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UPK1BO75841 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UPK1BO75841 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.79■□□□□ 0.28
UPK1BO75841 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UPK1BO75841 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
UPK1BO75841 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UPK1BO75841 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.78■□□□□ 0.28
UPK1BO75841 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
UPK1BO75841 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.78■□□□□ 0.28
UPK1BO75841 FAM21FP-204ENST00000608637 956 ntBASIC16.78■□□□□ 0.28
UPK1BO75841 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
UPK1BO75841 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
UPK1BO75841 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.78■□□□□ 0.28
UPK1BO75841 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
UPK1BO75841 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UPK1BO75841 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.78■□□□□ 0.28
UPK1BO75841 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UPK1BO75841 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPK1BO75841 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPK1BO75841 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.77■□□□□ 0.28
UPK1BO75841 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
UPK1BO75841 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.77■□□□□ 0.28
UPK1BO75841 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
UPK1BO75841 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UPK1BO75841 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UPK1BO75841 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
UPK1BO75841 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.77■□□□□ 0.28
UPK1BO75841 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.77■□□□□ 0.28
UPK1BO75841 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.77■□□□□ 0.28
UPK1BO75841 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.77■□□□□ 0.28
UPK1BO75841 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.77■□□□□ 0.28
UPK1BO75841 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.77■□□□□ 0.28
UPK1BO75841 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
UPK1BO75841 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.77■□□□□ 0.28
UPK1BO75841 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UPK1BO75841 AC135776.1-201ENST00000319817 2481 ntBASIC16.77■□□□□ 0.27
UPK1BO75841 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UPK1BO75841 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.77■□□□□ 0.27
UPK1BO75841 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.77■□□□□ 0.27
UPK1BO75841 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPK1BO75841 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPK1BO75841 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
UPK1BO75841 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPK1BO75841 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPK1BO75841 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPK1BO75841 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UPK1BO75841 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UPK1BO75841 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 AC018695.7-201ENST00000624587 2492 ntBASIC16.76■□□□□ 0.27
UPK1BO75841 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
UPK1BO75841 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.76■□□□□ 0.27
UPK1BO75841 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.76■□□□□ 0.27
UPK1BO75841 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UPK1BO75841 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.76■□□□□ 0.27
UPK1BO75841 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.76■□□□□ 0.27
UPK1BO75841 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.76■□□□□ 0.27
UPK1BO75841 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.76■□□□□ 0.27
UPK1BO75841 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.76■□□□□ 0.27
UPK1BO75841 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
UPK1BO75841 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.76■□□□□ 0.27
UPK1BO75841 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
UPK1BO75841 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
UPK1BO75841 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPK1BO75841 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms