Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HCN1O60741 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCN1O60741 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HCN1O60741 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.96■□□□□ 0.47
HCN1O60741 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HCN1O60741 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.96■□□□□ 0.47
HCN1O60741 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.96■□□□□ 0.47
HCN1O60741 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HCN1O60741 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.96■□□□□ 0.47
HCN1O60741 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HCN1O60741 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HCN1O60741 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.96■□□□□ 0.47
HCN1O60741 AC004264.1-201ENST00000608354 794 ntBASIC17.96■□□□□ 0.47
HCN1O60741 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HCN1O60741 AL049637.2-201ENST00000641778 930 ntBASIC17.96■□□□□ 0.47
HCN1O60741 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.96■□□□□ 0.47
HCN1O60741 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCN1O60741 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCN1O60741 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.96■□□□□ 0.46
HCN1O60741 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.96■□□□□ 0.46
HCN1O60741 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.96■□□□□ 0.46
HCN1O60741 AC026471.1-201ENST00000564629 3026 ntBASIC17.96■□□□□ 0.46
HCN1O60741 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.96■□□□□ 0.46
HCN1O60741 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.96■□□□□ 0.46
HCN1O60741 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HCN1O60741 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 AC120498.9-201ENST00000339021 3867 ntBASIC17.95■□□□□ 0.46
HCN1O60741 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HCN1O60741 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.95■□□□□ 0.46
HCN1O60741 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.95■□□□□ 0.46
HCN1O60741 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HCN1O60741 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.95■□□□□ 0.46
HCN1O60741 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.95■□□□□ 0.46
HCN1O60741 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 AC093484.2-201ENST00000580996 2166 ntBASIC17.95■□□□□ 0.46
HCN1O60741 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HCN1O60741 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.95■□□□□ 0.46
HCN1O60741 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 KRT17P2-201ENST00000300992 1314 ntBASIC17.95■□□□□ 0.46
HCN1O60741 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
HCN1O60741 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.95■□□□□ 0.46
HCN1O60741 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.95■□□□□ 0.46
HCN1O60741 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.95■□□□□ 0.46
HCN1O60741 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCN1O60741 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.94■□□□□ 0.46
HCN1O60741 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.94■□□□□ 0.46
HCN1O60741 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HCN1O60741 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HCN1O60741 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
HCN1O60741 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.94■□□□□ 0.46
HCN1O60741 AL353807.1-201ENST00000427475 662 ntBASIC17.94■□□□□ 0.46
HCN1O60741 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.94■□□□□ 0.46
HCN1O60741 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.94■□□□□ 0.46
HCN1O60741 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.94■□□□□ 0.46
HCN1O60741 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.94■□□□□ 0.46
HCN1O60741 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCN1O60741 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCN1O60741 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.93■□□□□ 0.46
HCN1O60741 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.93■□□□□ 0.46
HCN1O60741 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HCN1O60741 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HCN1O60741 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCN1O60741 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCN1O60741 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCN1O60741 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCN1O60741 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCN1O60741 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HCN1O60741 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms