Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.71■□□□□ 0.59
GFRA3O60609 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GFRA3O60609 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.71■□□□□ 0.59
GFRA3O60609 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GFRA3O60609 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.58
GFRA3O60609 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
GFRA3O60609 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GFRA3O60609 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.7■□□□□ 0.58
GFRA3O60609 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.7■□□□□ 0.58
GFRA3O60609 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.7■□□□□ 0.58
GFRA3O60609 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GFRA3O60609 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.7■□□□□ 0.58
GFRA3O60609 AC012676.1-201ENST00000574705 1949 ntBASIC18.7■□□□□ 0.58
GFRA3O60609 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 TMEM179-206ENST00000616017 1645 ntBASIC18.7■□□□□ 0.58
GFRA3O60609 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA3O60609 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.69■□□□□ 0.58
GFRA3O60609 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA3O60609 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA3O60609 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA3O60609 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.69■□□□□ 0.58
GFRA3O60609 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA3O60609 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA3O60609 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA3O60609 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA3O60609 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA3O60609 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.69■□□□□ 0.58
GFRA3O60609 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA3O60609 COX20P2-201ENST00000452636 358 ntBASIC18.69■□□□□ 0.58
GFRA3O60609 AC018712.1-201ENST00000455767 687 ntBASIC18.69■□□□□ 0.58
GFRA3O60609 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA3O60609 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA3O60609 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.69■□□□□ 0.58
GFRA3O60609 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA3O60609 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.69■□□□□ 0.58
GFRA3O60609 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA3O60609 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.69■□□□□ 0.58
GFRA3O60609 PHGDH-210ENST00000641115 1638 ntBASIC18.69■□□□□ 0.58
GFRA3O60609 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA3O60609 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA3O60609 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
GFRA3O60609 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA3O60609 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA3O60609 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA3O60609 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA3O60609 LINC01465-201ENST00000408887 1940 ntBASIC18.68■□□□□ 0.58
GFRA3O60609 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA3O60609 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA3O60609 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.68■□□□□ 0.58
GFRA3O60609 AC104109.2-201ENST00000602919 1418 ntBASIC18.68■□□□□ 0.58
GFRA3O60609 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.68■□□□□ 0.58
GFRA3O60609 AC242852.2-201ENST00000615738 1807 ntBASIC18.68■□□□□ 0.58
GFRA3O60609 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA3O60609 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA3O60609 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA3O60609 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA3O60609 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.68■□□□□ 0.58
GFRA3O60609 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.68■□□□□ 0.58
GFRA3O60609 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA3O60609 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.68■□□□□ 0.58
GFRA3O60609 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.68■□□□□ 0.58
GFRA3O60609 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
GFRA3O60609 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.68■□□□□ 0.58
GFRA3O60609 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.68■□□□□ 0.58
GFRA3O60609 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GFRA3O60609 AL157888.1-201ENST00000631930 593 ntBASIC18.68■□□□□ 0.58
GFRA3O60609 FAM215A-202ENST00000632077 792 ntBASIC18.68■□□□□ 0.58
GFRA3O60609 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.68■□□□□ 0.58
GFRA3O60609 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA3O60609 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.68■□□□□ 0.58
GFRA3O60609 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA3O60609 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA3O60609 NSUN5P1-202ENST00000421140 1535 ntBASIC18.68■□□□□ 0.58
GFRA3O60609 NSUN5P2-203ENST00000457352 1529 ntBASIC18.68■□□□□ 0.58
GFRA3O60609 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.68■□□□□ 0.58
GFRA3O60609 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GFRA3O60609 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
GFRA3O60609 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFRA3O60609 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.68■□□□□ 0.58
GFRA3O60609 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GFRA3O60609 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GFRA3O60609 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFRA3O60609 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms