Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 SPDYE15P-201ENST00000424157 909 ntBASIC18.15■□□□□ 0.5
URB1O60287 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
URB1O60287 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.15■□□□□ 0.5
URB1O60287 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.15■□□□□ 0.5
URB1O60287 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URB1O60287 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URB1O60287 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
URB1O60287 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URB1O60287 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
URB1O60287 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
URB1O60287 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URB1O60287 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.15■□□□□ 0.5
URB1O60287 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
URB1O60287 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
URB1O60287 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
URB1O60287 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.15■□□□□ 0.5
URB1O60287 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
URB1O60287 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.15■□□□□ 0.5
URB1O60287 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
URB1O60287 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
URB1O60287 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.14■□□□□ 0.5
URB1O60287 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.14■□□□□ 0.49
URB1O60287 AC016734.2-201ENST00000624325 1377 ntBASIC18.14■□□□□ 0.49
URB1O60287 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
URB1O60287 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
URB1O60287 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.14■□□□□ 0.49
URB1O60287 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
URB1O60287 AC079781.3-201ENST00000449110 356 ntBASIC18.14■□□□□ 0.49
URB1O60287 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.14■□□□□ 0.49
URB1O60287 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.14■□□□□ 0.49
URB1O60287 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.14■□□□□ 0.49
URB1O60287 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
URB1O60287 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
URB1O60287 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
URB1O60287 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
URB1O60287 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
URB1O60287 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
URB1O60287 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
URB1O60287 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.14■□□□□ 0.49
URB1O60287 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.14■□□□□ 0.49
URB1O60287 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.14■□□□□ 0.49
URB1O60287 GCSHP2-201ENST00000560971 527 ntBASIC18.14■□□□□ 0.49
URB1O60287 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
URB1O60287 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.13■□□□□ 0.49
URB1O60287 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
URB1O60287 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
URB1O60287 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
URB1O60287 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.13■□□□□ 0.49
URB1O60287 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
URB1O60287 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
URB1O60287 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
URB1O60287 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.13■□□□□ 0.49
URB1O60287 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
URB1O60287 AL645929.1-201ENST00000420084 975 ntBASIC18.13■□□□□ 0.49
URB1O60287 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.13■□□□□ 0.49
URB1O60287 AP002469.2-201ENST00000531724 424 ntBASIC18.13■□□□□ 0.49
URB1O60287 AC117500.6-201ENST00000624871 588 ntBASIC18.13■□□□□ 0.49
URB1O60287 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
URB1O60287 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
URB1O60287 AC244015.2-201ENST00000616358 1861 ntBASIC18.13■□□□□ 0.49
URB1O60287 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
URB1O60287 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
URB1O60287 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
URB1O60287 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
URB1O60287 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
URB1O60287 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
URB1O60287 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
URB1O60287 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
URB1O60287 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.12■□□□□ 0.49
URB1O60287 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.12■□□□□ 0.49
URB1O60287 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.12■□□□□ 0.49
URB1O60287 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.12■□□□□ 0.49
URB1O60287 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.12■□□□□ 0.49
URB1O60287 BX119927.1-201ENST00000636596 1552 ntBASIC18.12■□□□□ 0.49
URB1O60287 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
URB1O60287 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
URB1O60287 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
URB1O60287 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
URB1O60287 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.12■□□□□ 0.49
URB1O60287 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.12■□□□□ 0.49
URB1O60287 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
URB1O60287 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.12■□□□□ 0.49
URB1O60287 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.12■□□□□ 0.49
URB1O60287 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.12■□□□□ 0.49
URB1O60287 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.12■□□□□ 0.49
URB1O60287 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.12■□□□□ 0.49
URB1O60287 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.12■□□□□ 0.49
URB1O60287 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
URB1O60287 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
URB1O60287 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
URB1O60287 AC005229.4-201ENST00000610085 2198 ntBASIC18.12■□□□□ 0.49
URB1O60287 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
URB1O60287 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
URB1O60287 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
URB1O60287 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
URB1O60287 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
URB1O60287 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.11■□□□□ 0.49
URB1O60287 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.11■□□□□ 0.49
URB1O60287 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
URB1O60287 AC120114.3-201ENST00000611923 658 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms