Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.48■□□□□ 0.55
PRICKLE3O43900 TEX21P-204ENST00000641479 1693 ntBASIC18.48■□□□□ 0.55
PRICKLE3O43900 AC096733.2-201ENST00000609937 1394 ntBASIC18.48■□□□□ 0.55
PRICKLE3O43900 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PRICKLE3O43900 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.48■□□□□ 0.55
PRICKLE3O43900 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PRICKLE3O43900 BX088651.1-201ENST00000540551 451 ntBASIC18.48■□□□□ 0.55
PRICKLE3O43900 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.48■□□□□ 0.55
PRICKLE3O43900 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRICKLE3O43900 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 TSPY21P-201ENST00000433481 731 ntBASIC18.47■□□□□ 0.55
PRICKLE3O43900 TSPY23P-201ENST00000440136 739 ntBASIC18.47■□□□□ 0.55
PRICKLE3O43900 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 FITM1-202ENST00000559294 800 ntBASIC18.47■□□□□ 0.55
PRICKLE3O43900 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 AP000525.1-201ENST00000608286 694 ntBASIC18.47■□□□□ 0.55
PRICKLE3O43900 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 AC007952.6-201ENST00000573168 2673 ntBASIC18.47■□□□□ 0.55
PRICKLE3O43900 AC003957.1-201ENST00000625108 2673 ntBASIC18.47■□□□□ 0.55
PRICKLE3O43900 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PRICKLE3O43900 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 AL032819.2-201ENST00000624543 2162 ntBASIC18.47■□□□□ 0.55
PRICKLE3O43900 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRICKLE3O43900 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PRICKLE3O43900 AC005332.7-201ENST00000614046 2005 ntBASIC18.46■□□□□ 0.55
PRICKLE3O43900 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PRICKLE3O43900 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.46■□□□□ 0.55
PRICKLE3O43900 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PRICKLE3O43900 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.46■□□□□ 0.55
PRICKLE3O43900 AC097488.1-201ENST00000507834 756 ntBASIC18.46■□□□□ 0.55
PRICKLE3O43900 AP005242.2-201ENST00000580065 1175 ntBASIC18.46■□□□□ 0.55
PRICKLE3O43900 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.46■□□□□ 0.55
PRICKLE3O43900 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PRICKLE3O43900 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRICKLE3O43900 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
PRICKLE3O43900 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PRICKLE3O43900 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
PRICKLE3O43900 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PRICKLE3O43900 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE3O43900 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE3O43900 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE3O43900 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE3O43900 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE3O43900 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 CKBP1-201ENST00000565489 1086 ntBASIC18.45■□□□□ 0.54
PRICKLE3O43900 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms