Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.74□□□□□ -0.21
PAX4O43316 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PAX4O43316 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 NBPF21P-201ENST00000425093 1451 ntBASIC13.74□□□□□ -0.21
PAX4O43316 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PAX4O43316 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.74□□□□□ -0.21
PAX4O43316 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PAX4O43316 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PAX4O43316 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.74□□□□□ -0.21
PAX4O43316 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
PAX4O43316 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PAX4O43316 TUBB8P6-201ENST00000436895 1288 ntBASIC13.74□□□□□ -0.21
PAX4O43316 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 MTDHP1-201ENST00000605323 784 ntBASIC13.74□□□□□ -0.21
PAX4O43316 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 AL023875.1-201ENST00000640777 796 ntBASIC13.74□□□□□ -0.21
PAX4O43316 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.74□□□□□ -0.21
PAX4O43316 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PAX4O43316 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
PAX4O43316 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.74□□□□□ -0.21
PAX4O43316 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.74□□□□□ -0.21
PAX4O43316 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PAX4O43316 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
PAX4O43316 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PAX4O43316 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 AC087289.5-201ENST00000586076 3175 ntBASIC13.73□□□□□ -0.21
PAX4O43316 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
PAX4O43316 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
PAX4O43316 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PAX4O43316 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.73□□□□□ -0.21
PAX4O43316 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.73□□□□□ -0.21
PAX4O43316 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.73□□□□□ -0.21
PAX4O43316 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
PAX4O43316 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.73□□□□□ -0.21
PAX4O43316 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
PAX4O43316 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.73□□□□□ -0.21
PAX4O43316 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.73□□□□□ -0.21
PAX4O43316 KRASP1-201ENST00000407852 552 ntBASIC13.73□□□□□ -0.21
PAX4O43316 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.73□□□□□ -0.21
PAX4O43316 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.73□□□□□ -0.21
PAX4O43316 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.73□□□□□ -0.21
PAX4O43316 AC233263.1-201ENST00000578059 224 ntBASIC13.73□□□□□ -0.21
PAX4O43316 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.73□□□□□ -0.21
PAX4O43316 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.73□□□□□ -0.21
PAX4O43316 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.73□□□□□ -0.21
PAX4O43316 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.73□□□□□ -0.21
PAX4O43316 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.73□□□□□ -0.21
PAX4O43316 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PAX4O43316 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.72□□□□□ -0.21
PAX4O43316 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
PAX4O43316 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
PAX4O43316 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.72□□□□□ -0.21
PAX4O43316 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.72□□□□□ -0.21
PAX4O43316 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.72□□□□□ -0.21
PAX4O43316 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX4O43316 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms