Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PHF1O43189 AC004408.2-201ENST00000623613 2777 ntBASIC16.61■□□□□ 0.25
PHF1O43189 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.61■□□□□ 0.25
PHF1O43189 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.61■□□□□ 0.25
PHF1O43189 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHF1O43189 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PHF1O43189 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.6■□□□□ 0.25
PHF1O43189 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.6■□□□□ 0.25
PHF1O43189 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 PTBP1P-201ENST00000554374 1601 ntBASIC16.6■□□□□ 0.25
PHF1O43189 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.6■□□□□ 0.25
PHF1O43189 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.6■□□□□ 0.25
PHF1O43189 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 AC133681.1-201ENST00000465482 601 ntBASIC16.6■□□□□ 0.25
PHF1O43189 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.6■□□□□ 0.25
PHF1O43189 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.6■□□□□ 0.25
PHF1O43189 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 MTDHP1-201ENST00000605323 784 ntBASIC16.6■□□□□ 0.25
PHF1O43189 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.6■□□□□ 0.25
PHF1O43189 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.6■□□□□ 0.25
PHF1O43189 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.6■□□□□ 0.25
PHF1O43189 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.6■□□□□ 0.25
PHF1O43189 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PHF1O43189 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.6■□□□□ 0.25
PHF1O43189 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHF1O43189 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PHF1O43189 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.59■□□□□ 0.25
PHF1O43189 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.59■□□□□ 0.25
PHF1O43189 HLA-G-202ENST00000376815 851 ntBASIC16.59■□□□□ 0.25
PHF1O43189 HLA-G-203ENST00000376818 1127 ntBASIC16.59■□□□□ 0.25
PHF1O43189 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.59■□□□□ 0.25
PHF1O43189 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.59■□□□□ 0.25
PHF1O43189 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.59■□□□□ 0.25
PHF1O43189 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.59■□□□□ 0.25
PHF1O43189 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
PHF1O43189 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.59■□□□□ 0.25
PHF1O43189 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.59■□□□□ 0.25
PHF1O43189 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.59■□□□□ 0.25
PHF1O43189 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.59■□□□□ 0.25
PHF1O43189 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.59■□□□□ 0.25
PHF1O43189 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.59■□□□□ 0.25
PHF1O43189 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
PHF1O43189 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PHF1O43189 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.59■□□□□ 0.25
PHF1O43189 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PHF1O43189 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PHF1O43189 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PHF1O43189 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PHF1O43189 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHF1O43189 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.59■□□□□ 0.25
PHF1O43189 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.58■□□□□ 0.25
PHF1O43189 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PHF1O43189 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
PHF1O43189 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PHF1O43189 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PHF1O43189 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PHF1O43189 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PHF1O43189 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.58■□□□□ 0.25
PHF1O43189 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
PHF1O43189 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PHF1O43189 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PHF1O43189 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PHF1O43189 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.58■□□□□ 0.24
PHF1O43189 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.58■□□□□ 0.24
PHF1O43189 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PHF1O43189 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms