Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.44■□□□□ 0.54
NDUFS4O43181 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDUFS4O43181 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.44■□□□□ 0.54
NDUFS4O43181 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
NDUFS4O43181 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NDUFS4O43181 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NDUFS4O43181 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
NDUFS4O43181 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NDUFS4O43181 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.43■□□□□ 0.54
NDUFS4O43181 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 FAM197Y1-201ENST00000421178 764 ntBASIC18.43■□□□□ 0.54
NDUFS4O43181 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NDUFS4O43181 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 CD177P1-201ENST00000606252 935 ntBASIC18.43■□□□□ 0.54
NDUFS4O43181 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.43■□□□□ 0.54
NDUFS4O43181 AC131212.4-201ENST00000623606 975 ntBASIC18.43■□□□□ 0.54
NDUFS4O43181 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.43■□□□□ 0.54
NDUFS4O43181 AL049637.2-201ENST00000641778 930 ntBASIC18.43■□□□□ 0.54
NDUFS4O43181 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFS4O43181 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.42■□□□□ 0.54
NDUFS4O43181 AC113410.3-201ENST00000623366 203 ntBASIC18.42■□□□□ 0.54
NDUFS4O43181 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.42■□□□□ 0.54
NDUFS4O43181 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFS4O43181 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NDUFS4O43181 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.41■□□□□ 0.54
NDUFS4O43181 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NDUFS4O43181 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.41■□□□□ 0.54
NDUFS4O43181 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
NDUFS4O43181 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 AC004980.1-204ENST00000429707 299 ntBASIC18.41■□□□□ 0.54
NDUFS4O43181 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.41■□□□□ 0.54
NDUFS4O43181 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.41■□□□□ 0.54
NDUFS4O43181 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.41■□□□□ 0.54
NDUFS4O43181 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.41■□□□□ 0.54
NDUFS4O43181 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NDUFS4O43181 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.41■□□□□ 0.54
NDUFS4O43181 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NDUFS4O43181 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFS4O43181 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NDUFS4O43181 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS4O43181 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.4■□□□□ 0.54
NDUFS4O43181 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS4O43181 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS4O43181 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFS4O43181 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS4O43181 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS4O43181 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NDUFS4O43181 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS4O43181 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NDUFS4O43181 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS4O43181 AC093827.2-201ENST00000512654 315 ntBASIC18.4■□□□□ 0.54
NDUFS4O43181 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
NDUFS4O43181 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.4■□□□□ 0.54
NDUFS4O43181 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.4■□□□□ 0.54
NDUFS4O43181 AC066615.1-201ENST00000640911 628 ntBASIC18.4■□□□□ 0.54
NDUFS4O43181 AL031985.4-201ENST00000642138 673 ntBASIC18.4■□□□□ 0.54
NDUFS4O43181 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFS4O43181 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS4O43181 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NDUFS4O43181 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS4O43181 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFS4O43181 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.4■□□□□ 0.54
NDUFS4O43181 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
NDUFS4O43181 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms