Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
RRP8O43159 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.07■□□□□ 0.48
RRP8O43159 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.07■□□□□ 0.48
RRP8O43159 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.07■□□□□ 0.48
RRP8O43159 AC034232.1-201ENST00000506026 1064 ntBASIC18.07■□□□□ 0.48
RRP8O43159 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.07■□□□□ 0.48
RRP8O43159 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.07■□□□□ 0.48
RRP8O43159 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.07■□□□□ 0.48
RRP8O43159 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.07■□□□□ 0.48
RRP8O43159 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.06■□□□□ 0.48
RRP8O43159 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RRP8O43159 TMEM179-206ENST00000616017 1645 ntBASIC18.06■□□□□ 0.48
RRP8O43159 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RRP8O43159 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RRP8O43159 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RRP8O43159 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.06■□□□□ 0.48
RRP8O43159 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.06■□□□□ 0.48
RRP8O43159 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RRP8O43159 NUS1P1-201ENST00000446295 882 ntBASIC18.06■□□□□ 0.48
RRP8O43159 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.06■□□□□ 0.48
RRP8O43159 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RRP8O43159 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.06■□□□□ 0.48
RRP8O43159 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.06■□□□□ 0.48
RRP8O43159 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RRP8O43159 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
RRP8O43159 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RRP8O43159 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RRP8O43159 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RRP8O43159 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RRP8O43159 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RRP8O43159 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RRP8O43159 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RRP8O43159 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.06■□□□□ 0.48
RRP8O43159 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RRP8O43159 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RRP8O43159 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RRP8O43159 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RRP8O43159 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RRP8O43159 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RRP8O43159 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RRP8O43159 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.05■□□□□ 0.48
RRP8O43159 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RRP8O43159 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RRP8O43159 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RRP8O43159 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RRP8O43159 SPDYE15P-201ENST00000424157 909 ntBASIC18.05■□□□□ 0.48
RRP8O43159 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
RRP8O43159 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RRP8O43159 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RRP8O43159 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.05■□□□□ 0.48
RRP8O43159 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RRP8O43159 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RRP8O43159 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.05■□□□□ 0.48
RRP8O43159 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RRP8O43159 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RRP8O43159 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RRP8O43159 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RRP8O43159 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.04■□□□□ 0.48
RRP8O43159 AL121603.2-201ENST00000557373 2117 ntBASIC18.04■□□□□ 0.48
RRP8O43159 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.04■□□□□ 0.48
RRP8O43159 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.04■□□□□ 0.48
RRP8O43159 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 HBZP1-201ENST00000354915 429 ntBASIC18.04■□□□□ 0.48
RRP8O43159 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RRP8O43159 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 UNC93B7-201ENST00000509439 705 ntBASIC18.04■□□□□ 0.48
RRP8O43159 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.04■□□□□ 0.48
RRP8O43159 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RRP8O43159 AC011498.5-201ENST00000592027 486 ntBASIC18.04■□□□□ 0.48
RRP8O43159 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RRP8O43159 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.04■□□□□ 0.48
RRP8O43159 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RRP8O43159 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RRP8O43159 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RRP8O43159 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
RRP8O43159 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RRP8O43159 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RRP8O43159 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.03■□□□□ 0.48
RRP8O43159 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.03■□□□□ 0.48
RRP8O43159 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RRP8O43159 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.03■□□□□ 0.48
RRP8O43159 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.03■□□□□ 0.48
RRP8O43159 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms