Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
ABCC4O15439 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.5■■□□□ 1.51
ABCC4O15439 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
ABCC4O15439 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ABCC4O15439 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ABCC4O15439 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
ABCC4O15439 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ABCC4O15439 AC010203.1-204ENST00000548782 407 ntBASIC24.5■■□□□ 1.51
ABCC4O15439 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ABCC4O15439 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
ABCC4O15439 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ABCC4O15439 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
ABCC4O15439 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
ABCC4O15439 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC24.49■■□□□ 1.51
ABCC4O15439 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
ABCC4O15439 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC24.49■■□□□ 1.51
ABCC4O15439 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC24.49■■□□□ 1.51
ABCC4O15439 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.49■■□□□ 1.51
ABCC4O15439 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
ABCC4O15439 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.49■■□□□ 1.51
ABCC4O15439 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.49■■□□□ 1.51
ABCC4O15439 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC24.49■■□□□ 1.51
ABCC4O15439 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.49■■□□□ 1.51
ABCC4O15439 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC24.49■■□□□ 1.51
ABCC4O15439 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCC4O15439 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
ABCC4O15439 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ABCC4O15439 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ABCC4O15439 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
ABCC4O15439 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.48■■□□□ 1.51
ABCC4O15439 AC004980.1-204ENST00000429707 299 ntBASIC24.48■■□□□ 1.51
ABCC4O15439 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.48■■□□□ 1.51
ABCC4O15439 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ABCC4O15439 AC011506.1-201ENST00000474329 610 ntBASIC24.48■■□□□ 1.51
ABCC4O15439 RNF146-204ENST00000476956 884 ntTSL 2 BASIC24.48■■□□□ 1.51
ABCC4O15439 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.48■■□□□ 1.51
ABCC4O15439 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.48■■□□□ 1.51
ABCC4O15439 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.48■■□□□ 1.51
ABCC4O15439 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
ABCC4O15439 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.48■■□□□ 1.51
ABCC4O15439 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC24.48■■□□□ 1.51
ABCC4O15439 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.48■■□□□ 1.51
ABCC4O15439 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ABCC4O15439 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC24.47■■□□□ 1.51
ABCC4O15439 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCC4O15439 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCC4O15439 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ABCC4O15439 AC104076.2-201ENST00000448912 469 ntBASIC24.47■■□□□ 1.51
ABCC4O15439 DUX4L26-201ENST00000489078 1255 ntBASIC24.47■■□□□ 1.51
ABCC4O15439 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
ABCC4O15439 AL160286.2-201ENST00000567150 934 ntBASIC24.47■■□□□ 1.51
ABCC4O15439 AP005242.2-201ENST00000580065 1175 ntBASIC24.47■■□□□ 1.51
ABCC4O15439 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.47■■□□□ 1.51
ABCC4O15439 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC24.47■■□□□ 1.51
ABCC4O15439 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCC4O15439 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
ABCC4O15439 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.47■■□□□ 1.51
ABCC4O15439 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCC4O15439 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCC4O15439 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
ABCC4O15439 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCC4O15439 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCC4O15439 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCC4O15439 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
ABCC4O15439 KRT8P41-201ENST00000533985 1514 ntBASIC24.47■■□□□ 1.51
ABCC4O15439 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC24.46■■□□□ 1.51
ABCC4O15439 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ABCC4O15439 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ABCC4O15439 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC24.46■■□□□ 1.51
ABCC4O15439 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.46■■□□□ 1.51
ABCC4O15439 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ABCC4O15439 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
ABCC4O15439 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.46■■□□□ 1.51
ABCC4O15439 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
ABCC4O15439 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.46■■□□□ 1.51
ABCC4O15439 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.46■■□□□ 1.51
ABCC4O15439 DGCR10-201ENST00000609839 495 ntBASIC24.46■■□□□ 1.51
ABCC4O15439 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ABCC4O15439 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ABCC4O15439 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.46■■□□□ 1.51
ABCC4O15439 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ABCC4O15439 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ABCC4O15439 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC24.46■■□□□ 1.51
ABCC4O15439 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
ABCC4O15439 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms