Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AP000692.2-201ENST00000608391 879 ntBASIC22.99■■□□□ 1.27
FOXN1O15353 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.99■■□□□ 1.27
FOXN1O15353 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
FOXN1O15353 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
FOXN1O15353 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXN1O15353 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXN1O15353 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.98■■□□□ 1.27
FOXN1O15353 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.98■■□□□ 1.27
FOXN1O15353 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
FOXN1O15353 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
FOXN1O15353 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXN1O15353 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXN1O15353 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXN1O15353 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
FOXN1O15353 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXN1O15353 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.98■■□□□ 1.27
FOXN1O15353 IFNL4P1-201ENST00000607083 540 ntBASIC22.98■■□□□ 1.27
FOXN1O15353 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.98■■□□□ 1.27
FOXN1O15353 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXN1O15353 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXN1O15353 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
FOXN1O15353 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.98■■□□□ 1.27
FOXN1O15353 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.97■■□□□ 1.27
FOXN1O15353 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXN1O15353 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXN1O15353 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC22.97■■□□□ 1.27
FOXN1O15353 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXN1O15353 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC22.97■■□□□ 1.27
FOXN1O15353 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.97■■□□□ 1.27
FOXN1O15353 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
FOXN1O15353 C1QL1P1-201ENST00000568105 661 ntBASIC22.97■■□□□ 1.27
FOXN1O15353 TBCB-205ENST00000585746 875 ntTSL 3 BASIC22.97■■□□□ 1.27
FOXN1O15353 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
FOXN1O15353 AC022898.2-201ENST00000616822 1312 ntBASIC22.97■■□□□ 1.27
FOXN1O15353 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
FOXN1O15353 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.97■■□□□ 1.27
FOXN1O15353 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXN1O15353 AC092338.2-201ENST00000568827 1415 ntBASIC22.97■■□□□ 1.27
FOXN1O15353 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
FOXN1O15353 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
FOXN1O15353 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.97■■□□□ 1.27
FOXN1O15353 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.96■■□□□ 1.27
FOXN1O15353 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
FOXN1O15353 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.96■■□□□ 1.27
FOXN1O15353 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
FOXN1O15353 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.96■■□□□ 1.27
FOXN1O15353 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.96■■□□□ 1.27
FOXN1O15353 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.96■■□□□ 1.27
FOXN1O15353 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.96■■□□□ 1.27
FOXN1O15353 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN1O15353 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXN1O15353 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXN1O15353 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXN1O15353 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
FOXN1O15353 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXN1O15353 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXN1O15353 MFAP1P1-201ENST00000442257 1255 ntBASIC22.95■■□□□ 1.26
FOXN1O15353 AC079781.3-201ENST00000449110 356 ntBASIC22.95■■□□□ 1.26
FOXN1O15353 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC22.95■■□□□ 1.26
FOXN1O15353 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.95■■□□□ 1.26
FOXN1O15353 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
FOXN1O15353 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC22.95■■□□□ 1.26
FOXN1O15353 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.95■■□□□ 1.26
FOXN1O15353 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.95■■□□□ 1.26
FOXN1O15353 MIR2861-201ENST00000636310 90 ntBASIC22.95■■□□□ 1.26
FOXN1O15353 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
FOXN1O15353 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN1O15353 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN1O15353 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN1O15353 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
FOXN1O15353 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN1O15353 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.94■■□□□ 1.26
FOXN1O15353 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
FOXN1O15353 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
FOXN1O15353 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN1O15353 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN1O15353 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN1O15353 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.94■■□□□ 1.26
FOXN1O15353 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
FOXN1O15353 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.94■■□□□ 1.26
FOXN1O15353 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.94■■□□□ 1.26
FOXN1O15353 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
FOXN1O15353 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC22.94■■□□□ 1.26
FOXN1O15353 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC22.94■■□□□ 1.26
FOXN1O15353 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC22.94■■□□□ 1.26
FOXN1O15353 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms