Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RTL8CO15255 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTL8CO15255 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.81□□□□□ -0.36
RTL8CO15255 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RTL8CO15255 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTL8CO15255 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTL8CO15255 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTL8CO15255 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.81□□□□□ -0.36
RTL8CO15255 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.81□□□□□ -0.36
RTL8CO15255 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.81□□□□□ -0.36
RTL8CO15255 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.81□□□□□ -0.36
RTL8CO15255 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.81□□□□□ -0.36
RTL8CO15255 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.81□□□□□ -0.36
RTL8CO15255 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.81□□□□□ -0.36
RTL8CO15255 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.81□□□□□ -0.36
RTL8CO15255 GCSHP2-201ENST00000560971 527 ntBASIC12.81□□□□□ -0.36
RTL8CO15255 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.81□□□□□ -0.36
RTL8CO15255 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RTL8CO15255 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RTL8CO15255 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTL8CO15255 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTL8CO15255 KRT8P41-201ENST00000533985 1514 ntBASIC12.81□□□□□ -0.36
RTL8CO15255 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RTL8CO15255 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.81□□□□□ -0.36
RTL8CO15255 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC12.81□□□□□ -0.36
RTL8CO15255 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTL8CO15255 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTL8CO15255 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTL8CO15255 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC12.81□□□□□ -0.36
RTL8CO15255 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTL8CO15255 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTL8CO15255 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.81□□□□□ -0.36
RTL8CO15255 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RTL8CO15255 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC12.8□□□□□ -0.36
RTL8CO15255 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC12.8□□□□□ -0.36
RTL8CO15255 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
RTL8CO15255 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.8□□□□□ -0.36
RTL8CO15255 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
RTL8CO15255 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
RTL8CO15255 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
RTL8CO15255 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.8□□□□□ -0.36
RTL8CO15255 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 NEK4P2-201ENST00000580004 1012 ntBASIC12.8□□□□□ -0.36
RTL8CO15255 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.8□□□□□ -0.36
RTL8CO15255 AC092119.3-201ENST00000612618 583 ntBASIC12.8□□□□□ -0.36
RTL8CO15255 NPAP1P7-201ENST00000613027 823 ntBASIC12.8□□□□□ -0.36
RTL8CO15255 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RTL8CO15255 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC12.8□□□□□ -0.36
RTL8CO15255 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RTL8CO15255 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
RTL8CO15255 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC12.8□□□□□ -0.36
RTL8CO15255 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
RTL8CO15255 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTL8CO15255 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
RTL8CO15255 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC12.79□□□□□ -0.36
RTL8CO15255 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.79□□□□□ -0.36
RTL8CO15255 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RTL8CO15255 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.79□□□□□ -0.36
RTL8CO15255 SPDYE15P-201ENST00000424157 909 ntBASIC12.79□□□□□ -0.36
RTL8CO15255 SPDYE13P-201ENST00000445314 798 ntBASIC12.79□□□□□ -0.36
RTL8CO15255 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.79□□□□□ -0.36
RTL8CO15255 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.79□□□□□ -0.36
RTL8CO15255 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.79□□□□□ -0.36
RTL8CO15255 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.79□□□□□ -0.36
RTL8CO15255 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.79□□□□□ -0.36
RTL8CO15255 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RTL8CO15255 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.79□□□□□ -0.36
RTL8CO15255 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RTL8CO15255 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTL8CO15255 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RTL8CO15255 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RTL8CO15255 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms