Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHD2O14647 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
CHD2O14647 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHD2O14647 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
CHD2O14647 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC26.82■■□□□ 1.88
CHD2O14647 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHD2O14647 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC26.82■■□□□ 1.88
CHD2O14647 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC26.82■■□□□ 1.88
CHD2O14647 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
CHD2O14647 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHD2O14647 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHD2O14647 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC26.82■■□□□ 1.88
CHD2O14647 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
CHD2O14647 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC26.82■■□□□ 1.88
CHD2O14647 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC26.82■■□□□ 1.88
CHD2O14647 AL136038.4-201ENST00000603606 1261 ntBASIC26.82■■□□□ 1.88
CHD2O14647 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHD2O14647 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC26.82■■□□□ 1.88
CHD2O14647 AL391807.1-203ENST00000604392 2365 ntBASIC26.82■■□□□ 1.88
CHD2O14647 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC26.82■■□□□ 1.88
CHD2O14647 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHD2O14647 LINC00265-3P-201ENST00000447588 903 ntBASIC26.81■■□□□ 1.88
CHD2O14647 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHD2O14647 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC26.81■■□□□ 1.88
CHD2O14647 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC26.81■■□□□ 1.88
CHD2O14647 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC26.81■■□□□ 1.88
CHD2O14647 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.81■■□□□ 1.88
CHD2O14647 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHD2O14647 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHD2O14647 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHD2O14647 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
CHD2O14647 RNA5SP419-201ENST00000515908 135 ntBASIC26.81■■□□□ 1.88
CHD2O14647 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD2O14647 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CHD2O14647 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC26.8■■□□□ 1.88
CHD2O14647 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD2O14647 GAD2-202ENST00000376248 680 ntTSL 5 BASIC26.8■■□□□ 1.88
CHD2O14647 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC26.8■■□□□ 1.88
CHD2O14647 MIR662-201ENST00000384847 95 ntBASIC26.8■■□□□ 1.88
CHD2O14647 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC26.8■■□□□ 1.88
CHD2O14647 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC26.8■■□□□ 1.88
CHD2O14647 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC26.8■■□□□ 1.88
CHD2O14647 IL11-204ENST00000590625 1028 ntTSL 2 BASIC26.8■■□□□ 1.88
CHD2O14647 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
CHD2O14647 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD2O14647 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD2O14647 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHD2O14647 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CHD2O14647 AKR1C7P-201ENST00000305623 895 ntBASIC26.79■■□□□ 1.88
CHD2O14647 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC26.79■■□□□ 1.88
CHD2O14647 KRT16P4-201ENST00000453883 522 ntBASIC26.79■■□□□ 1.88
CHD2O14647 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC26.79■■□□□ 1.88
CHD2O14647 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC26.79■■□□□ 1.88
CHD2O14647 AC074051.2-201ENST00000565115 352 ntBASIC26.79■■□□□ 1.88
CHD2O14647 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC26.79■■□□□ 1.88
CHD2O14647 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHD2O14647 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHD2O14647 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHD2O14647 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHD2O14647 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CHD2O14647 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHD2O14647 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHD2O14647 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC26.79■■□□□ 1.88
CHD2O14647 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC26.79■■□□□ 1.88
CHD2O14647 AL121912.1-201ENST00000603683 238 ntBASIC26.79■■□□□ 1.88
CHD2O14647 ANKRD18DP-204ENST00000455355 1975 ntBASIC26.78■■□□□ 1.88
CHD2O14647 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHD2O14647 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHD2O14647 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CHD2O14647 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC26.78■■□□□ 1.88
CHD2O14647 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC26.78■■□□□ 1.88
CHD2O14647 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC26.78■■□□□ 1.88
CHD2O14647 PENK-208ENST00000523051 772 ntTSL 5 BASIC26.78■■□□□ 1.88
CHD2O14647 AP000867.3-201ENST00000524675 377 ntBASIC26.78■■□□□ 1.88
CHD2O14647 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC26.78■■□□□ 1.88
CHD2O14647 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CHD2O14647 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CHD2O14647 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHD2O14647 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.78■■□□□ 1.88
CHD2O14647 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
CHD2O14647 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC26.77■■□□□ 1.88
CHD2O14647 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHD2O14647 TEX30-205ENST00000376029 959 ntTSL 2 BASIC26.77■■□□□ 1.88
CHD2O14647 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHD2O14647 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHD2O14647 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC26.77■■□□□ 1.88
CHD2O14647 FOSL1P1-201ENST00000511041 816 ntBASIC26.77■■□□□ 1.88
CHD2O14647 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC26.77■■□□□ 1.88
CHD2O14647 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC26.77■■□□□ 1.88
CHD2O14647 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CHD2O14647 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHD2O14647 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
CHD2O14647 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
CHD2O14647 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC26.76■■□□□ 1.88
CHD2O14647 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHD2O14647 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC26.76■■□□□ 1.87
CHD2O14647 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CHD2O14647 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CHD2O14647 MIR3917-201ENST00000580971 93 ntBASIC26.76■■□□□ 1.87
CHD2O14647 AC138894.3-201ENST00000603787 634 ntBASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms