Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 AL390955.1-201ENST00000428694 934 ntBASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 AC128688.1-201ENST00000487626 519 ntBASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 EGLN1P1-201ENST00000531623 762 ntBASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 AC099778.1-201ENST00000568593 1911 ntBASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 AC020907.5-201ENST00000624372 1936 ntBASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMX2-CTNND1H3BSU7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMX2-CTNND1H3BSU7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 AL162377.1-201ENST00000618844 1793 ntBASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 ATP5G1P1-201ENST00000448724 379 ntBASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 KRT18P16-201ENST00000510337 1294 ntBASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMX2-CTNND1H3BSU7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 TFP1-202ENST00000475455 1573 ntBASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 AC073508.3-201ENST00000619697 1419 ntBASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.85■□□□□ 0.61
TMX2-CTNND1H3BSU7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 B3GAT3P1-201ENST00000471720 806 ntBASIC18.84■□□□□ 0.61
TMX2-CTNND1H3BSU7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms