Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RBFOX3A6NFN3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RBFOX3A6NFN3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RBFOX3A6NFN3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RBFOX3A6NFN3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RBFOX3A6NFN3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 AC141586.5-201ENST00000624546 2050 ntBASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 AC073592.3-201ENST00000625118 1834 ntBASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 AL356441.2-201ENST00000443009 864 ntBASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 AC126763.1-201ENST00000552015 2118 ntBASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBFOX3A6NFN3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 KRT8P17-201ENST00000453110 1448 ntBASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 PCDHA12-202ENST00000613593 2588 ntBASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 AC011298.3-201ENST00000615796 283 ntBASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBFOX3A6NFN3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms