Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 AC026471.1-201ENST00000564629 3026 ntBASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 PRORSD1P-201ENST00000295112 541 ntBASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 BX323043.1-201ENST00000641006 1765 ntBASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC162PA2VCL2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 AL160286.2-201ENST00000567150 934 ntBASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 AL359736.2-201ENST00000621992 437 ntBASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC162PA2VCL2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CCDC162PA2VCL2 AL161938.1-201ENST00000569833 2180 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms