Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 EP400NL-214ENST00000641289 2402 ntBASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 AP002383.4-201ENST00000442518 975 ntBASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC163A0A0D9SF12 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC163A0A0D9SF12 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CCDC163A0A0D9SF12 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC163A0A0D9SF12 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.63
CCDC163A0A0D9SF12 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC163A0A0D9SF12 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC163A0A0D9SF12 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC163A0A0D9SF12 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms