Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 KRT8P8-201ENST00000434750 1448 ntBASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 AC106820.2-201ENST00000563775 3264 ntBASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV4A0A0B4J268 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 UNC93B4-201ENST00000505679 747 ntBASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 ZNF815P-204ENST00000434898 1737 ntBASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV4A0A0B4J268 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 HLA-L-209ENST00000420110 1011 ntBASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 TUBB8P6-201ENST00000436895 1288 ntBASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 PRKY-204ENST00000533551 1019 ntBASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV4A0A0B4J268 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV4A0A0B4J268 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms