Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 MIR935-201ENST00000401179 91 ntBASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 AF201337.1-201ENST00000520239 748 ntBASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 C2orf69P4-201ENST00000565394 541 ntBASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV8-4A0A0B4J246 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 AC073111.5-205ENST00000641717 521 ntBASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAV8-4A0A0B4J246 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV8-4A0A0B4J246 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV8-4A0A0B4J246 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV8-4A0A0B4J246 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV8-4A0A0B4J246 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV8-4A0A0B4J246 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV8-4A0A0B4J246 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV8-4A0A0B4J246 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV8-4A0A0B4J246 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.46□□□□□ -0.26
TRAV8-4A0A0B4J246 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
TRAV8-4A0A0B4J246 AL049812.1-201ENST00000432563 2267 ntBASIC13.46□□□□□ -0.26
TRAV8-4A0A0B4J246 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 MKRN4P-201ENST00000444706 1521 ntBASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV8-4A0A0B4J246 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms