Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 PCDHAC2-203ENST00000615316 3011 ntBASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV2A0A0B4J234 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 AL359736.2-201ENST00000621992 437 ntBASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 FAM197Y4-202ENST00000622692 608 ntBASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV2A0A0B4J234 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 PRORSD1P-201ENST00000295112 541 ntBASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 ABHD17AP1-201ENST00000358206 933 ntBASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 UBE2SP1-201ENST00000450587 669 ntBASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV2A0A0B4J234 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV2A0A0B4J234 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV2A0A0B4J234 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV2A0A0B4J234 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV2A0A0B4J234 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV2A0A0B4J234 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
TRAV2A0A0B4J234 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV2A0A0B4J234 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV2A0A0B4J234 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV2A0A0B4J234 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV2A0A0B4J234 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV2A0A0B4J234 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms