Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 AL691432.2-201ENST00000607222 2038 ntBASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 AC233263.1-201ENST00000578059 224 ntBASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV26-1A0A087WT03 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV26-1A0A087WT03 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV26-1A0A087WT03 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 TMEM191A-211ENST00000637163 1067 ntBASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV26-1A0A087WT03 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 AC018553.1-201ENST00000616682 1458 ntBASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 MST1L-201ENST00000442552 2185 ntBASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 AL121829.2-201ENST00000620908 328 ntBASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms