Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AP001636.2-201ENST00000525517 696 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC103843.2-201ENST00000530523 682 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC011602.1-201ENST00000546484 331 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC011611.5-201ENST00000552477 578 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC093227.2-201ENST00000589357 285 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AC006557.5-201ENST00000603126 811 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 XIAPP1-201ENST00000603162 600 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AL445493.3-201ENST00000619568 477 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 CR381572.1-201ENST00000625098 102 ntBASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.5□□□□□ -1.85
LRRC40Q9H9A6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AL365440.1-201ENST00000436135 2167 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 RNA5SP124-201ENST00000362739 110 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 RNU6-1249P-201ENST00000363237 111 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AP002088.1-201ENST00000382740 395 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 MTCO3P12-201ENST00000416718 547 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 RPL23AP82-202ENST00000427528 469 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 TXNP1-201ENST00000441872 371 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AL096803.2-201ENST00000450032 677 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AL353718.1-201ENST00000451028 517 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AC097262.1-201ENST00000452559 548 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 snoU13.4-201ENST00000458916 104 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AC089999.1-201ENST00000460336 374 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AC010468.1-201ENST00000461022 817 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 NAP1L1P3-201ENST00000462291 880 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AC025768.1-201ENST00000510057 267 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AC119751.1-201ENST00000513357 765 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 RNU1-61P-201ENST00000516107 151 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 RNA5SP468-201ENST00000516782 93 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 PAICSP4-201ENST00000517543 1253 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 LSM6P2-201ENST00000552208 177 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 NIFKP8-201ENST00000560500 874 ntBASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC40Q9H9A6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC017071.1-201ENST00000564407 2204 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 MTND4LP20-201ENST00000402379 270 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 RN7SKP111-201ENST00000410349 271 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AIMP1P1-201ENST00000418670 937 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 FNDC3CP-201ENST00000420795 1155 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AL606495.1-201ENST00000422100 813 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 RPL31P12-201ENST00000422587 358 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 BTBD7P2-201ENST00000441962 620 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC008264.1-201ENST00000447612 367 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 RPL7P59-201ENST00000447700 943 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC004022.1-201ENST00000447766 1066 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 GTF2IP12-201ENST00000456547 356 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AL136126.1-201ENST00000473603 402 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC106707.2-201ENST00000484182 374 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms