Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF31Q96EP0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.62□□□□□ -1.67
RNF31Q96EP0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.62□□□□□ -1.67
RNF31Q96EP0 EIF5A2P1-201ENST00000564027 460 ntBASIC4.62□□□□□ -1.67
RNF31Q96EP0 AC137800.2-201ENST00000574375 120 ntBASIC4.62□□□□□ -1.67
RNF31Q96EP0 MIR4637-201ENST00000582405 84 ntBASIC4.62□□□□□ -1.67
RNF31Q96EP0 MIR4697-201ENST00000582977 78 ntBASIC4.62□□□□□ -1.67
RNF31Q96EP0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF31Q96EP0 AL139286.1-201ENST00000604465 483 ntBASIC4.62□□□□□ -1.67
RNF31Q96EP0 MIR6863-201ENST00000636112 90 ntBASIC4.62□□□□□ -1.67
RNF31Q96EP0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RNF31Q96EP0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.62□□□□□ -1.67
RNF31Q96EP0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF31Q96EP0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF31Q96EP0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RNF31Q96EP0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF31Q96EP0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RNF31Q96EP0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF31Q96EP0 AL118496.1-201ENST00000440201 1812 ntBASIC4.62□□□□□ -1.67
RNF31Q96EP0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF31Q96EP0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF31Q96EP0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RNF31Q96EP0 SALL4P2-201ENST00000423288 2910 ntBASIC4.62□□□□□ -1.67
RNF31Q96EP0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF31Q96EP0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF31Q96EP0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF31Q96EP0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RNF31Q96EP0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC092162.3-201ENST00000624511 1624 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF31Q96EP0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 NEAT1-202ENST00000501122 22743 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 Z95327.2-201ENST00000414579 1873 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 Y_RNA.9-201ENST00000362354 101 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 RNU6-984P-201ENST00000363236 109 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 RNU6-921P-201ENST00000384361 107 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 RNU6-780P-201ENST00000391030 104 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 MTCO3P40-201ENST00000392516 676 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 RPS3AP36-201ENST00000398190 775 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF31Q96EP0 MTATP6P27-201ENST00000416987 621 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC069157.1-201ENST00000421749 137 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 NPM1P24-201ENST00000428039 894 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC009238.2-201ENST00000431026 355 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC023347.2-201ENST00000433994 462 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 YWHAZP8-201ENST00000436935 731 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AL512326.1-201ENST00000443050 721 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 OR6K1P-201ENST00000456766 971 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC041039.1-201ENST00000485656 536 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC026979.1-201ENST00000492525 396 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC106872.3-201ENST00000495104 446 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 CEACAMP10-202ENST00000495431 496 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF31Q96EP0 ARL4AP2-201ENST00000507378 601 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC093824.1-201ENST00000508796 343 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC010342.1-201ENST00000514047 877 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 RPL21P5-201ENST00000554662 472 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 NDUFB4P11-201ENST00000560510 395 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 BNIP3P11-201ENST00000603878 563 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AP000907.4-201ENST00000604143 237 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AL391358.1-201ENST00000605342 190 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 CR392039.4-201ENST00000624968 501 ntBASIC4.61□□□□□ -1.67
RNF31Q96EP0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF31Q96EP0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF31Q96EP0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF31Q96EP0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF31Q96EP0 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF31Q96EP0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF31Q96EP0 AC139713.2-214ENST00000642059 1811 ntBASIC4.6□□□□□ -1.67
RNF31Q96EP0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
RNF31Q96EP0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms