Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC063979.1-201ENST00000415539 377 ntBASIC2.34□□□□□ -2.03
CCL20P78556 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.34□□□□□ -2.03
CCL20P78556 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.34□□□□□ -2.03
CCL20P78556 SETP8-201ENST00000435341 628 ntBASIC2.34□□□□□ -2.03
CCL20P78556 AC097499.1-201ENST00000444277 208 ntBASIC2.34□□□□□ -2.03
CCL20P78556 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.34□□□□□ -2.03
CCL20P78556 RPL26P28-201ENST00000451325 435 ntBASIC2.34□□□□□ -2.03
CCL20P78556 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CCL20P78556 RN7SL385P-201ENST00000468873 276 ntBASIC2.34□□□□□ -2.03
CCL20P78556 AC017015.1-201ENST00000477387 286 ntBASIC2.34□□□□□ -2.03
CCL20P78556 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.34□□□□□ -2.03
CCL20P78556 SNORD59.2-201ENST00000516873 68 ntBASIC2.34□□□□□ -2.03
CCL20P78556 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.34□□□□□ -2.03
CCL20P78556 HMGB1P46-201ENST00000520062 610 ntBASIC2.34□□□□□ -2.03
CCL20P78556 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.34□□□□□ -2.03
CCL20P78556 HAUS1P3-201ENST00000523909 662 ntBASIC2.34□□□□□ -2.03
CCL20P78556 AC019227.1-201ENST00000526902 510 ntBASIC2.34□□□□□ -2.03
CCL20P78556 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.34□□□□□ -2.03
CCL20P78556 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.34□□□□□ -2.03
CCL20P78556 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.34□□□□□ -2.03
CCL20P78556 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.34□□□□□ -2.03
CCL20P78556 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.34□□□□□ -2.03
CCL20P78556 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.34□□□□□ -2.03
CCL20P78556 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.34□□□□□ -2.03
CCL20P78556 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCL20P78556 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.34□□□□□ -2.03
CCL20P78556 LINC00216-201ENST00000623548 1126 ntBASIC2.34□□□□□ -2.03
CCL20P78556 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.34□□□□□ -2.03
CCL20P78556 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CCL20P78556 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.33□□□□□ -2.04
CCL20P78556 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.33□□□□□ -2.04
CCL20P78556 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CCL20P78556 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCL20P78556 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CCL20P78556 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.33□□□□□ -2.04
CCL20P78556 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CCL20P78556 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCL20P78556 AC073325.2-201ENST00000339545 159 ntBASIC2.33□□□□□ -2.04
CCL20P78556 SNORD67-201ENST00000390833 111 ntBASIC2.33□□□□□ -2.04
CCL20P78556 RNU6-837P-201ENST00000391056 108 ntBASIC2.33□□□□□ -2.04
CCL20P78556 RNU6-628P-201ENST00000410675 107 ntBASIC2.33□□□□□ -2.04
CCL20P78556 VTA1P1-201ENST00000414044 866 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.33□□□□□ -2.04
CCL20P78556 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.33□□□□□ -2.04
CCL20P78556 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.33□□□□□ -2.04
CCL20P78556 AL445528.1-201ENST00000426330 420 ntBASIC2.33□□□□□ -2.04
CCL20P78556 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.33□□□□□ -2.04
CCL20P78556 RPL36P19-201ENST00000430744 301 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AC122718.1-201ENST00000439448 744 ntBASIC2.33□□□□□ -2.04
CCL20P78556 RPS29P7-201ENST00000439662 171 ntBASIC2.33□□□□□ -2.04
CCL20P78556 RABEPKP1-201ENST00000440529 1026 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.33□□□□□ -2.04
CCL20P78556 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.33□□□□□ -2.04
CCL20P78556 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.33□□□□□ -2.04
CCL20P78556 snoU13.3-201ENST00000459441 104 ntBASIC2.33□□□□□ -2.04
CCL20P78556 RPS26P21-201ENST00000475397 348 ntBASIC2.33□□□□□ -2.04
CCL20P78556 SCARNA13-201ENST00000516672 275 ntBASIC2.33□□□□□ -2.04
CCL20P78556 RNU6-889P-201ENST00000517189 103 ntBASIC2.33□□□□□ -2.04
CCL20P78556 SNORA31.26-201ENST00000517250 137 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AC008676.3-201ENST00000521237 435 ntBASIC2.33□□□□□ -2.04
CCL20P78556 C1DP5-201ENST00000525775 383 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AC004486.1-201ENST00000546846 233 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.33□□□□□ -2.04
CCL20P78556 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.33□□□□□ -2.04
CCL20P78556 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.33□□□□□ -2.04
CCL20P78556 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.33□□□□□ -2.04
CCL20P78556 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.33□□□□□ -2.04
CCL20P78556 AC010653.1-201ENST00000571108 881 ntBASIC2.33□□□□□ -2.04
CCL20P78556 SNORD84-203ENST00000584275 78 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AC107982.3-201ENST00000584957 985 ntBASIC2.33□□□□□ -2.04
CCL20P78556 BDH2P1-201ENST00000602288 736 ntBASIC2.33□□□□□ -2.04
CCL20P78556 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.33□□□□□ -2.04
CCL20P78556 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.33□□□□□ -2.04
CCL20P78556 AC090115.4-201ENST00000609970 188 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AC009464.1-201ENST00000615731 469 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AL355493.4-201ENST00000618530 292 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AC009039.2-201ENST00000624524 529 ntBASIC2.33□□□□□ -2.04
CCL20P78556 RNA5SP196-201ENST00000625967 102 ntBASIC2.33□□□□□ -2.04
CCL20P78556 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.33□□□□□ -2.04
CCL20P78556 AC009487.2-201ENST00000420969 6821 ntBASIC2.33□□□□□ -2.04
CCL20P78556 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCL20P78556 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCL20P78556 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCL20P78556 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCL20P78556 SAGE4P-201ENST00000442271 3381 ntBASIC2.32□□□□□ -2.04
CCL20P78556 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.32□□□□□ -2.04
CCL20P78556 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.32□□□□□ -2.04
CCL20P78556 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.32□□□□□ -2.04
CCL20P78556 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.32□□□□□ -2.04
CCL20P78556 AL512646.1-201ENST00000269395 1077 ntBASIC2.32□□□□□ -2.04
CCL20P78556 RNU1-32P-201ENST00000363937 159 ntBASIC2.32□□□□□ -2.04
CCL20P78556 SNORA58B-201ENST00000364259 136 ntBASIC2.32□□□□□ -2.04
CCL20P78556 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.32□□□□□ -2.04
CCL20P78556 RNU4-65P-201ENST00000410473 140 ntBASIC2.32□□□□□ -2.04
CCL20P78556 RNU4-78P-201ENST00000410940 126 ntBASIC2.32□□□□□ -2.04
CCL20P78556 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.32□□□□□ -2.04
CCL20P78556 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.32□□□□□ -2.04
CCL20P78556 AC011242.1-201ENST00000433596 1158 ntBASIC2.32□□□□□ -2.04
CCL20P78556 AC073063.1-201ENST00000434352 607 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms